PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat03G0019970.2 Alkaloid GS high pass
Lsat03G0019980.1 Alkaloid GS high pass
Lsat03G0019980.2 Alkaloid GS high pass
Lsat04G0000680.1 Alkaloid GS low borderline
Lsat04G0000680.2 Alkaloid GS low borderline
Lsat04G0010480.1 Alkaloid GS high pass
Lsat04G0010480.2 Alkaloid GS high pass
Lsat04G0010490.1 Alkaloid GS high pass
Lsat04G0016500.1 Alkaloid GS low borderline
Lsat04G0019210.1 Alkaloid GS high pass
Lsat04G0045900.1 Alkaloid GS high pass
Lsat05G0034020.1 Alkaloid GS low borderline
Lsat05G0034020.2 Alkaloid GS low borderline
Lsat05G0049140.1 Alkaloid GS low borderline
Lsat05G0049140.2 Alkaloid GS low borderline
Lsat05G0049150.1 Alkaloid GS low borderline
Lsat06G0019540.1 Alkaloid GS low borderline
Lsat06G0019540.2 Alkaloid GS low borderline
Lsat06G0019540.3 Alkaloid GS low borderline
Lsat06G0028120.2 Alkaloid GS low borderline
Lsat07G0015250.3 Alkaloid GS low borderline
Lsat07G0020530.1 Alkaloid GS high pass
Lsat07G0020530.2 Alkaloid GS high pass
Lsat07G0020530.3 Alkaloid GS high pass
Lsat07G0020530.4 Alkaloid GS medium pass
Lsat08G0003400.1 Alkaloid GS low borderline
Lsat08G0003400.2 Alkaloid GS low borderline
Lsat08G0003930.1 Alkaloid GS low borderline
Lsat08G0006960.1 Alkaloid GS low borderline
Lsat08G0009140.1 Alkaloid GS medium pass
Lsat08G0024470.1 Alkaloid GS low borderline
Lsat08G0024470.2 Alkaloid GS low borderline
Lsat08G0027770.1 Alkaloid GS low borderline
Lsat08G0027770.2 Alkaloid GS low borderline
Lsat08G0027770.3 Alkaloid GS low borderline
Lsat08G0034080.1 Alkaloid GS high pass
Lsat08G0034080.3 Alkaloid GS high pass
Lsat08G0041060.1 Alkaloid GS medium pass
Lsat08G0046160.1 Alkaloid GS low borderline
Lsat08G0046160.2 Alkaloid GS low borderline
Lsat08G0046200.1 Alkaloid GS low borderline
Lsat08G0046200.2 Alkaloid GS low borderline
Lsat09G0017510.1 Alkaloid GS low borderline
Lsat09G0017520.1 Alkaloid GS low borderline
Lsat09G0017540.1 Alkaloid GS low borderline
Lsat09G0017540.2 Alkaloid GS low borderline
Lsat09G0034960.1 Alkaloid GS high pass
Lsat09G0034960.2 Alkaloid GS medium pass
Lsat01G0012360.1 Alkaloid H6H low borderline
Lsat02G0006900.1 Alkaloid H6H low borderline