PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat09G0021920.1 Terpenoid HMGS low borderline
Lsat02G0004840.1 Terpenoid IDI medium pass
Lsat02G0004840.2 Terpenoid IDI medium pass
Lsat08G0000030.1 Terpenoid IDI low borderline
Lsat08G0000580.1 Terpenoid IDI medium pass
Lsat08G0000580.2 Terpenoid IDI medium pass
Lsat08G0013090.2 Terpenoid IDI low borderline
Lsat08G0013090.3 Terpenoid IDI low borderline
Lsat08G0046780.2 Terpenoid IDI low borderline
Lsat02G0008430.1 Terpenoid MCT/IspD low borderline
Lsat02G0015720.1 Terpenoid MCT/IspD low borderline
Lsat09G0038750.1 Terpenoid MCT/IspD high pass
Lsat09G0038750.2 Terpenoid MCT/IspD high pass
Lsat05G0038530.1 Terpenoid MDS/IspF low borderline
Lsat06G0024820.1 Terpenoid MDS/IspF high pass
Lsat06G0024820.2 Terpenoid MDS/IspF high pass
Lsat02G0030230.1 Terpenoid MVD medium pass
Lsat02G0030230.2 Terpenoid MVD medium pass
Lsat03G0038270.1 Terpenoid MVD low borderline
Lsat04G0024710.1 Terpenoid MVD low borderline
Lsat05G0002660.1 Terpenoid MVD low borderline
Lsat05G0002660.2 Terpenoid MVD low borderline
Lsat08G0003750.1 Terpenoid MVD low borderline
Lsat08G0003750.2 Terpenoid MVD low borderline
Lsat08G0003750.3 Terpenoid MVD low borderline
Lsat09G0015720.1 Terpenoid MVD low borderline
Lsat09G0015720.2 Terpenoid MVD low borderline
Lsat09G0015770.1 Terpenoid MVD medium pass
Lsat02G0016760.1 Terpenoid MVK medium pass
Lsat02G0016760.2 Terpenoid MVK medium pass
Lsat04G0039300.1 Terpenoid MVK medium pass
Lsat06G0033810.1 Terpenoid MVK low borderline
Lsat06G0033810.2 Terpenoid MVK low borderline
Lsat07G0022380.1 Terpenoid MVK low borderline
Lsat07G0022380.2 Terpenoid MVK low borderline
Lsat08G0036850.1 Terpenoid MVK low borderline
Lsat03G0010750.1 Terpenoid PMK medium pass
Lsat03G0010750.2 Terpenoid PMK medium pass
Lsat06G0021330.1 Terpenoid PMK medium pass
Lsat06G0021330.2 Terpenoid PMK medium pass
Lsat06G0021330.3 Terpenoid PMK medium pass
Lsat00G0004570.1 Terpenoid TPS medium pass
Lsat01G0001500.1 Terpenoid TPS medium pass
Lsat01G0001500.2 Terpenoid TPS medium pass
Lsat01G0001540.1 Terpenoid TPS medium pass
Lsat01G0001540.2 Terpenoid TPS medium pass
Lsat01G0027880.1 Terpenoid TPS medium pass
Lsat01G0035720.1 Terpenoid TPS medium pass
Lsat01G0035720.2 Terpenoid TPS medium pass
Lsat01G0035720.3 Terpenoid TPS medium pass