PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat02G0032170.2 Alkaloid T16H medium borderline
Lsat03G0000830.1 Alkaloid T16H medium borderline
Lsat03G0000830.2 Alkaloid T16H medium borderline
Lsat03G0000840.1 Alkaloid T16H medium borderline
Lsat03G0000840.2 Alkaloid T16H medium borderline
Lsat03G0010110.1 Alkaloid T16H medium borderline
Lsat03G0024070.1 Alkaloid T16H medium borderline
Lsat03G0027350.1 Alkaloid T16H medium borderline
Lsat03G0027400.1 Alkaloid T16H medium borderline
Lsat03G0027440.2 Alkaloid T16H medium borderline
Lsat03G0027470.1 Alkaloid T16H medium borderline
Lsat03G0032150.1 Alkaloid T16H medium pass
Lsat03G0032170.1 Alkaloid T16H medium borderline
Lsat03G0032170.2 Alkaloid T16H medium borderline
Lsat04G0010100.1 Alkaloid T16H medium borderline
Lsat04G0017360.2 Alkaloid T16H medium borderline
Lsat04G0034320.1 Alkaloid T16H medium borderline
Lsat04G0034600.1 Alkaloid T16H low borderline
Lsat04G0034600.2 Alkaloid T16H low borderline
Lsat04G0035000.1 Alkaloid T16H medium borderline
Lsat04G0035000.2 Alkaloid T16H medium borderline
Lsat04G0035110.1 Alkaloid T16H medium borderline
Lsat04G0035120.1 Alkaloid T16H medium borderline
Lsat04G0035150.1 Alkaloid T16H medium borderline
Lsat04G0035190.1 Alkaloid T16H low borderline
Lsat04G0035190.3 Alkaloid T16H medium borderline
Lsat04G0042890.1 Alkaloid T16H medium borderline
Lsat04G0042900.1 Alkaloid T16H medium borderline
Lsat05G0000380.2 Alkaloid T16H medium borderline
Lsat05G0006220.1 Alkaloid T16H medium borderline
Lsat05G0035350.3 Alkaloid T16H low borderline
Lsat06G0026040.3 Alkaloid T16H medium borderline
Lsat06G0031690.1 Alkaloid T16H medium borderline
Lsat06G0031690.2 Alkaloid T16H medium borderline
Lsat06G0032880.1 Alkaloid T16H medium borderline
Lsat06G0032880.2 Alkaloid T16H medium borderline
Lsat06G0032890.1 Alkaloid T16H medium borderline
Lsat06G0032890.2 Alkaloid T16H medium borderline
Lsat06G0032900.1 Alkaloid T16H medium borderline
Lsat06G0032900.2 Alkaloid T16H medium borderline
Lsat07G0000010.2 Alkaloid T16H low borderline
Lsat07G0000290.1 Alkaloid T16H medium borderline
Lsat07G0000290.2 Alkaloid T16H medium borderline
Lsat07G0011130.1 Alkaloid T16H medium borderline
Lsat07G0011150.1 Alkaloid T16H medium borderline
Lsat07G0027600.1 Alkaloid T16H medium borderline
Lsat08G0031060.1 Alkaloid T16H medium borderline
Lsat08G0043000.3 Alkaloid T16H medium borderline
Lsat08G0045980.1 Alkaloid T16H medium borderline
Lsat08G0046020.1 Alkaloid T16H medium borderline