PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Gene Pathway Family Confidence Status
Lsat03G0028750.1 Alkaloid 7DLGT high pass
Lsat03G0034520.1 Alkaloid 7DLGT low borderline
Lsat03G0034520.2 Alkaloid 7DLGT low borderline
Lsat03G0034530.1 Alkaloid 7DLGT low borderline
Lsat03G0034530.2 Alkaloid 7DLGT low borderline
Lsat03G0034540.1 Alkaloid 7DLGT medium pass
Lsat03G0034540.3 Alkaloid 7DLGT low borderline
Lsat03G0034550.1 Alkaloid 7DLGT medium pass
Lsat03G0034570.1 Alkaloid 7DLGT low borderline
Lsat03G0034600.1 Alkaloid 7DLGT medium pass
Lsat03G0034610.1 Alkaloid 7DLGT low borderline
Lsat03G0034760.1 Alkaloid 7DLGT low borderline
Lsat03G0034770.1 Alkaloid 7DLGT medium pass
Lsat03G0037100.1 Alkaloid 7DLGT medium pass
Lsat03G0037100.2 Alkaloid 7DLGT medium pass
Lsat03G0037430.1 Alkaloid 7DLGT medium pass
Lsat03G0038200.1 Alkaloid 7DLGT medium pass
Lsat04G0000810.1 Alkaloid 7DLGT low borderline
Lsat04G0000840.1 Alkaloid 7DLGT low borderline
Lsat04G0000860.1 Alkaloid 7DLGT low borderline
Lsat04G0005020.1 Alkaloid 7DLGT medium pass
Lsat04G0005020.2 Alkaloid 7DLGT medium pass
Lsat04G0036710.1 Alkaloid 7DLGT medium pass
Lsat04G0037140.1 Alkaloid 7DLGT medium pass
Lsat04G0037150.1 Alkaloid 7DLGT medium pass
Lsat04G0037170.1 Alkaloid 7DLGT medium pass
Lsat04G0037180.1 Alkaloid 7DLGT high pass
Lsat04G0041640.1 Alkaloid 7DLGT medium pass
Lsat04G0043550.1 Alkaloid 7DLGT low borderline
Lsat04G0048030.1 Alkaloid 7DLGT low borderline
Lsat04G0048040.1 Alkaloid 7DLGT medium pass
Lsat04G0048050.1 Alkaloid 7DLGT medium pass
Lsat05G0006720.1 Alkaloid 7DLGT low borderline
Lsat05G0006750.1 Alkaloid 7DLGT low borderline
Lsat05G0006760.1 Alkaloid 7DLGT low borderline
Lsat05G0006770.1 Alkaloid 7DLGT low borderline
Lsat05G0008130.1 Alkaloid 7DLGT medium pass
Lsat05G0008130.2 Alkaloid 7DLGT medium pass
Lsat05G0008150.1 Alkaloid 7DLGT low borderline
Lsat05G0017410.1 Alkaloid 7DLGT medium pass
Lsat05G0017430.1 Alkaloid 7DLGT medium pass
Lsat05G0029680.1 Alkaloid 7DLGT low borderline
Lsat05G0029720.1 Alkaloid 7DLGT low borderline
Lsat05G0030020.1 Alkaloid 7DLGT low borderline
Lsat05G0030030.1 Alkaloid 7DLGT low borderline
Lsat05G0030040.1 Alkaloid 7DLGT low borderline
Lsat05G0030280.1 Alkaloid 7DLGT low borderline
Lsat05G0037200.1 Alkaloid 7DLGT low borderline
Lsat05G0037200.2 Alkaloid 7DLGT low borderline
Lsat05G0040270.1 Alkaloid 7DLGT low borderline