PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Lsat03G0035070.1 Flavonoid ANS/LDOX medium borderline
Lsat03G0035130.1 Flavonoid ANS/LDOX low borderline
Lsat03G0035130.2 Flavonoid ANS/LDOX low borderline
Lsat03G0035140.1 Flavonoid ANS/LDOX medium borderline
Lsat03G0035160.1 Flavonoid ANS/LDOX medium borderline
Lsat03G0035160.2 Flavonoid ANS/LDOX medium borderline
Lsat03G0035210.1 Flavonoid ANS/LDOX medium pass
Lsat03G0035210.3 Flavonoid ANS/LDOX medium pass
Lsat04G0047300.1 Flavonoid ANS/LDOX low borderline
Lsat05G0003160.2 Flavonoid ANS/LDOX low borderline
Lsat05G0003160.3 Flavonoid ANS/LDOX low borderline
Lsat05G0003160.4 Flavonoid ANS/LDOX low borderline
Lsat05G0035700.1 Flavonoid ANS/LDOX low borderline
Lsat05G0043310.2 Flavonoid ANS/LDOX medium borderline
Lsat06G0006190.1 Flavonoid ANS/LDOX medium borderline
Lsat06G0009810.1 Flavonoid ANS/LDOX low borderline
Lsat06G0009810.2 Flavonoid ANS/LDOX low borderline
Lsat06G0020420.1 Flavonoid ANS/LDOX medium borderline
Lsat07G0001390.1 Flavonoid ANS/LDOX medium borderline
Lsat07G0001390.2 Flavonoid ANS/LDOX medium borderline
Lsat07G0009440.1 Flavonoid ANS/LDOX low borderline
Lsat07G0012260.1 Flavonoid ANS/LDOX medium borderline
Lsat08G0019250.1 Flavonoid ANS/LDOX medium borderline
Lsat09G0011160.1 Flavonoid ANS/LDOX medium borderline
Lsat09G0030400.1 Flavonoid ANS/LDOX medium borderline
Lsat09G0030400.2 Flavonoid ANS/LDOX medium pass
Lsat09G0031970.1 Flavonoid ANS/LDOX medium borderline
Lsat09G0031970.2 Flavonoid ANS/LDOX medium borderline
Lsat00G0001670.1 Flavonoid C4H medium borderline
Lsat01G0002380.1 Flavonoid C4H low borderline
Lsat02G0020070.1 Flavonoid C4H low borderline
Lsat02G0039090.1 Flavonoid C4H low borderline
Lsat03G0027420.1 Flavonoid C4H low borderline
Lsat03G0027420.2 Flavonoid C4H low borderline
Lsat03G0027440.1 Flavonoid C4H low borderline
Lsat04G0012480.1 Flavonoid C4H low borderline
Lsat08G0031060.1 Flavonoid C4H medium borderline
Lsat09G0005590.1 Flavonoid C4H medium borderline
Lsat02G0021260.1 Flavonoid CHI medium pass
Lsat04G0051620.1 Flavonoid CHI medium pass
Lsat06G0012220.1 Flavonoid CHI medium pass
Lsat08G0004060.1 Flavonoid CHI medium pass
Lsat08G0004060.2 Flavonoid CHI medium pass
Lsat09G0021850.1 Flavonoid CHI medium pass
Lsat02G0011100.1 Flavonoid CHS medium pass
Lsat02G0011100.2 Flavonoid CHS medium pass
Lsat02G0011120.1 Flavonoid CHS medium pass
Lsat02G0011120.2 Flavonoid CHS medium pass
Lsat02G0011120.3 Flavonoid CHS medium pass
Lsat02G0011150.1 Flavonoid CHS medium pass