PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Lsat03G0000830.1 Rosmarinic Acid C4H low borderline
Lsat03G0000830.2 Rosmarinic Acid C4H low borderline
Lsat03G0000840.1 Rosmarinic Acid C4H low borderline
Lsat03G0000840.2 Rosmarinic Acid C4H low borderline
Lsat03G0001300.1 Rosmarinic Acid C4H low borderline
Lsat03G0001330.1 Rosmarinic Acid C4H medium pass
Lsat03G0001330.2 Rosmarinic Acid C4H medium pass
Lsat03G0001340.1 Rosmarinic Acid C4H low borderline
Lsat03G0003580.1 Rosmarinic Acid C4H low borderline
Lsat03G0006210.1 Rosmarinic Acid C4H low borderline
Lsat03G0009190.1 Rosmarinic Acid C4H low borderline
Lsat03G0011650.1 Rosmarinic Acid C4H low borderline
Lsat03G0011650.2 Rosmarinic Acid C4H low borderline
Lsat03G0011660.1 Rosmarinic Acid C4H low borderline
Lsat03G0011670.1 Rosmarinic Acid C4H low borderline
Lsat03G0011670.2 Rosmarinic Acid C4H low borderline
Lsat03G0011670.3 Rosmarinic Acid C4H low borderline
Lsat03G0011690.1 Rosmarinic Acid C4H low borderline
Lsat03G0011760.1 Rosmarinic Acid C4H low borderline
Lsat03G0011760.3 Rosmarinic Acid C4H low borderline
Lsat03G0011820.2 Rosmarinic Acid C4H low borderline
Lsat03G0018340.1 Rosmarinic Acid C4H low borderline
Lsat03G0018340.2 Rosmarinic Acid C4H low borderline
Lsat03G0020210.1 Rosmarinic Acid C4H low borderline
Lsat03G0020220.1 Rosmarinic Acid C4H low borderline
Lsat03G0023170.1 Rosmarinic Acid C4H low borderline
Lsat03G0023300.2 Rosmarinic Acid C4H low borderline
Lsat03G0023300.3 Rosmarinic Acid C4H low borderline
Lsat03G0023300.4 Rosmarinic Acid C4H low borderline
Lsat03G0023310.1 Rosmarinic Acid C4H low borderline
Lsat03G0023310.2 Rosmarinic Acid C4H low borderline
Lsat03G0023310.3 Rosmarinic Acid C4H low borderline
Lsat03G0023580.1 Rosmarinic Acid C4H low borderline
Lsat03G0024070.1 Rosmarinic Acid C4H low borderline
Lsat03G0024440.1 Rosmarinic Acid C4H low borderline
Lsat03G0024440.2 Rosmarinic Acid C4H low borderline
Lsat03G0027350.1 Rosmarinic Acid C4H low borderline
Lsat03G0027400.1 Rosmarinic Acid C4H medium pass
Lsat03G0027420.1 Rosmarinic Acid C4H low borderline
Lsat03G0027420.2 Rosmarinic Acid C4H low borderline
Lsat03G0027430.1 Rosmarinic Acid C4H medium pass
Lsat03G0027430.2 Rosmarinic Acid C4H medium pass
Lsat03G0027430.3 Rosmarinic Acid C4H medium pass
Lsat03G0027440.1 Rosmarinic Acid C4H low borderline
Lsat03G0027440.2 Rosmarinic Acid C4H low borderline
Lsat03G0027440.3 Rosmarinic Acid C4H medium pass
Lsat03G0027450.1 Rosmarinic Acid C4H low borderline
Lsat03G0027470.1 Rosmarinic Acid C4H medium pass
Lsat03G0028380.1 Rosmarinic Acid C4H low borderline
Lsat03G0032170.1 Rosmarinic Acid C4H low borderline