PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsat04G0035200.1 Rosmarinic Acid C4H low borderline
Lsat04G0035200.2 Rosmarinic Acid C4H low borderline
Lsat04G0035210.1 Rosmarinic Acid C4H low borderline
Lsat04G0035220.1 Rosmarinic Acid C4H low borderline
Lsat04G0035230.1 Rosmarinic Acid C4H medium pass
Lsat04G0035310.1 Rosmarinic Acid C4H low borderline
Lsat04G0035320.1 Rosmarinic Acid C4H low borderline
Lsat04G0035410.1 Rosmarinic Acid C4H low borderline
Lsat04G0035560.1 Rosmarinic Acid C4H low borderline
Lsat04G0036670.1 Rosmarinic Acid C4H low borderline
Lsat04G0036830.1 Rosmarinic Acid C4H medium pass
Lsat04G0036840.1 Rosmarinic Acid C4H medium pass
Lsat04G0037610.1 Rosmarinic Acid C4H low borderline
Lsat04G0037620.1 Rosmarinic Acid C4H medium pass
Lsat04G0037700.1 Rosmarinic Acid C4H medium pass
Lsat04G0041910.1 Rosmarinic Acid C4H low borderline
Lsat04G0042890.1 Rosmarinic Acid C4H low borderline
Lsat04G0042900.1 Rosmarinic Acid C4H low borderline
Lsat04G0043610.1 Rosmarinic Acid C4H medium pass
Lsat04G0043750.1 Rosmarinic Acid C4H medium pass
Lsat04G0047910.1 Rosmarinic Acid C4H low borderline
Lsat04G0047910.2 Rosmarinic Acid C4H low borderline
Lsat04G0051130.1 Rosmarinic Acid C4H low borderline
Lsat04G0051610.1 Rosmarinic Acid C4H low borderline
Lsat04G0051610.2 Rosmarinic Acid C4H low borderline
Lsat05G0000380.1 Rosmarinic Acid C4H low borderline
Lsat05G0000380.2 Rosmarinic Acid C4H low borderline
Lsat05G0000380.3 Rosmarinic Acid C4H low borderline
Lsat05G0000840.1 Rosmarinic Acid C4H low borderline
Lsat05G0003740.1 Rosmarinic Acid C4H low borderline
Lsat05G0004000.1 Rosmarinic Acid C4H medium pass
Lsat05G0004010.1 Rosmarinic Acid C4H medium pass
Lsat05G0004010.2 Rosmarinic Acid C4H low borderline
Lsat05G0006220.1 Rosmarinic Acid C4H low borderline
Lsat05G0006290.1 Rosmarinic Acid C4H low borderline
Lsat05G0006290.2 Rosmarinic Acid C4H low borderline
Lsat05G0006440.1 Rosmarinic Acid C4H low borderline
Lsat05G0007110.1 Rosmarinic Acid C4H low borderline
Lsat05G0012350.1 Rosmarinic Acid C4H low borderline
Lsat05G0012350.2 Rosmarinic Acid C4H low borderline
Lsat05G0012780.1 Rosmarinic Acid C4H low borderline
Lsat05G0012780.2 Rosmarinic Acid C4H low borderline
Lsat05G0013760.1 Rosmarinic Acid C4H low borderline
Lsat05G0015030.1 Rosmarinic Acid C4H low borderline
Lsat05G0015040.1 Rosmarinic Acid C4H medium pass
Lsat05G0015040.2 Rosmarinic Acid C4H medium pass
Lsat05G0016100.1 Rosmarinic Acid C4H medium pass
Lsat05G0016100.2 Rosmarinic Acid C4H medium pass
Lsat05G0016870.1 Rosmarinic Acid C4H medium pass
Lsat05G0016870.2 Rosmarinic Acid C4H medium pass