PlantSME Plant secondary metabolism enzyme database

Lactuca sativa (lactuca_sativa)

Imported from atlas release summary for Lactuca sativa.

3881
Candidate Protein Records
3297
Pathway-Level Records
8379
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1017 19 BAHD (403) View species results
Alkaloid pathway 700 24 7DLGT (155) View species results
Phenylpropanoid pathway 646 11 POD (292) View species results
Flavonoid pathway 376 10 UFGT (249) View species results
Rosmarinic acid pathway 314 7 C4H (138) View species results
Steroid pathway 244 13 SMT1/SMT2/SMT3 (116) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3525 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 583 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsat08G0001420.1 Phenylpropanoid COMT medium pass
Lsat08G0029180.1 Phenylpropanoid COMT low borderline
Lsat08G0029180.2 Phenylpropanoid COMT low borderline
Lsat08G0029180.3 Phenylpropanoid COMT low borderline
Lsat08G0029410.1 Phenylpropanoid COMT low borderline
Lsat08G0037240.1 Phenylpropanoid COMT medium pass
Lsat08G0037240.2 Phenylpropanoid COMT medium pass
Lsat08G0037250.1 Phenylpropanoid COMT medium pass
Lsat08G0037290.1 Phenylpropanoid COMT medium pass
Lsat08G0037290.2 Phenylpropanoid COMT medium pass
Lsat08G0037320.1 Phenylpropanoid COMT medium pass
Lsat08G0037320.2 Phenylpropanoid COMT medium pass
Lsat08G0040030.1 Phenylpropanoid COMT medium pass
Lsat09G0004120.1 Phenylpropanoid COMT low borderline
Lsat09G0004120.2 Phenylpropanoid COMT medium pass
Lsat09G0004120.3 Phenylpropanoid COMT medium pass
Lsat09G0004120.4 Phenylpropanoid COMT medium pass
Lsat09G0033450.1 Phenylpropanoid COMT medium pass
Lsat00G0002450.1 Phenylpropanoid CSE medium pass
Lsat00G0002450.2 Phenylpropanoid CSE medium pass
Lsat00G0002490.1 Phenylpropanoid CSE medium pass
Lsat01G0007430.1 Phenylpropanoid CSE medium pass
Lsat01G0007440.1 Phenylpropanoid CSE medium pass
Lsat01G0007450.1 Phenylpropanoid CSE medium pass
Lsat01G0007460.1 Phenylpropanoid CSE medium pass
Lsat01G0007460.2 Phenylpropanoid CSE medium pass
Lsat01G0007460.3 Phenylpropanoid CSE medium pass
Lsat01G0007470.1 Phenylpropanoid CSE medium pass
Lsat01G0007480.1 Phenylpropanoid CSE medium pass
Lsat01G0009660.1 Phenylpropanoid CSE medium pass
Lsat01G0009670.1 Phenylpropanoid CSE medium pass
Lsat01G0009680.1 Phenylpropanoid CSE medium pass
Lsat01G0011530.1 Phenylpropanoid CSE medium pass
Lsat01G0011530.2 Phenylpropanoid CSE medium pass
Lsat01G0016920.1 Phenylpropanoid CSE medium pass
Lsat01G0016920.2 Phenylpropanoid CSE medium pass
Lsat01G0035240.1 Phenylpropanoid CSE low borderline
Lsat01G0035240.2 Phenylpropanoid CSE low borderline
Lsat02G0000650.1 Phenylpropanoid CSE medium pass
Lsat02G0000650.2 Phenylpropanoid CSE medium pass
Lsat02G0034060.1 Phenylpropanoid CSE medium pass
Lsat02G0034060.2 Phenylpropanoid CSE medium pass
Lsat02G0034060.3 Phenylpropanoid CSE medium pass
Lsat03G0000990.1 Phenylpropanoid CSE low borderline
Lsat03G0000990.2 Phenylpropanoid CSE medium pass
Lsat03G0009240.1 Phenylpropanoid CSE medium pass
Lsat03G0013800.1 Phenylpropanoid CSE medium pass
Lsat03G0021700.1 Phenylpropanoid CSE medium pass
Lsat03G0021700.2 Phenylpropanoid CSE medium pass
Lsat03G0026710.1 Phenylpropanoid CSE medium pass