Mangifera indica (mangifera_indica)
Imported from atlas release summary for Mangifera indica.
1797
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1797
Candidate Genes
C4H
6.7%
BAHD
6.22%
C3'H/CYP98A
4.77%
UGT
4.5%
4CL
3.79%
7DLGT
3.69%
POD
3.62%
UFGT
3.34%
Other Families
63.37%
More Families (95)
CYP76
134
3.19%
IFS
132
3.15%
F3H
116
2.76%
T3O
97
2.31%
NMT
90
2.14%
LAC
81
1.93%
CAD
74
1.76%
DWF4/CYP90B1
71
1.69%
CODM/T6ODM
70
1.67%
STR
69
1.64%
F3'H/CYP75B
68
1.62%
G8O/G8H
66
1.57%
SMT1/SMT2/SMT3
64
1.53%
CAS
63
1.5%
CSE
61
1.45%
TPS
58
1.38%
BR6OX2/CYP85A2
57
1.36%
H6H
55
1.31%
PYKS
54
1.29%
TRI/TRII
52
1.24%
GES
52
1.24%
T16H
48
1.14%
FNS
45
1.07%
F3'5'H/CYP75A
43
1.02%
HCT
41
0.98%
PAL
39
0.93%
IFR
37
0.88%
BBE
35
0.83%
GS
34
0.81%
CYP90D1
33
0.79%
CYP71
31
0.74%
SGD
30
0.71%
PMT
29
0.69%
IO
28
0.67%
7DLH
28
0.67%
CHS
28
0.67%
RAS
28
0.67%
TAT
26
0.62%
NCS
25
0.6%
F5H/CYP84A
25
0.6%
BR6OX1/CYP85A1
25
0.6%
ANR
21
0.5%
COMT
20
0.48%
CNMT
19
0.45%
CCR
19
0.45%
CPD/CYP90A1
19
0.45%
COR
17
0.41%
SLS
17
0.41%
DFR
17
0.41%
LAMT
16
0.38%
8HGO
14
0.33%
ROT3/CYP90C1
13
0.31%
HPPR
12
0.29%
CYP80B1
10
0.24%
CYP719
10
0.24%
16OMT
10
0.24%
GGPPS
10
0.24%
CPR
9
0.21%
SQE
9
0.21%
ANS/LDOX
8
0.19%
CHI
8
0.19%
CYP51G1
8
0.19%
MPO
7
0.17%
TYDC_DDC
7
0.17%
CCoAOMT
7
0.17%
SQS/FDFT1
7
0.17%
FPPS
7
0.17%
ISY
6
0.14%
AACT
6
0.14%
DXS
6
0.14%
MVD
6
0.14%
PMK
6
0.14%
SMO1/SMO2
5
0.12%
DET2
5
0.12%
MVK
5
0.12%
HMGR
5
0.12%
6OMT_4OMT_SOMT
4
0.1%
FLS
4
0.1%
ODC
3
0.07%
CYP80F1
3
0.07%
TDC
3
0.07%
DWF7
3
0.07%
MDS/IspF
3
0.07%
HMGS
3
0.07%
MCT/IspD
3
0.07%
ADC
2
0.05%
FK
2
0.05%
DWF1
2
0.05%
HDS/IspG
2
0.05%
IDI
2
0.05%
CMK/IspE
2
0.05%
DXR
2
0.05%
CPI1
1
0.02%
HYD1
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 550 | 19 | BAHD (209) | View species results |
| Alkaloid pathway | 417 | 24 | 7DLGT (59) | View species results |
| Phenylpropanoid pathway | 373 | 12 | POD (138) | View species results |
| Flavonoid pathway | 229 | 11 | UFGT (122) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (37) | View species results |
| Steroid pathway | 113 | 14 | CAS (49) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1447 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 330 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mind01G0000060.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind01G0004420.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind01G0007700.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind01G0009020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind01G0011250.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind01G0014620.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind02G0002430.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind02G0005700.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind02G0005990.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind02G0006000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind02G0010310.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind03G0002450.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind03G0004270.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind03G0004810.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind03G0005340.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind03G0011990.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind04G0011070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind05G0009970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind05G0013930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind06G0001690.1 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| Mind06G0006110.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind06G0006850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind07G0001970.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind07G0004000.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind07G0008160.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind08G0006630.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind08G0010320.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind08G0011480.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind08G0012220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind09G0005330.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind09G0016900.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind09G0017140.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind09G0017150.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind10G0004070.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind12G0000470.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind12G0002350.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind12G0002360.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| Mind12G0007120.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind12G0012330.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind12G0012400.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mind13G0008040.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind14G0000760.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind14G0006650.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind14G0006660.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind15G0010230.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind15G0010350.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind15G0013020.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind15G0013140.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind16G0006530.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mind17G0007670.1 | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |