Mangifera indica (mangifera_indica)
Imported from atlas release summary for Mangifera indica.
1797
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1797
Candidate Genes
C4H
6.7%
BAHD
6.22%
C3'H/CYP98A
4.77%
UGT
4.5%
4CL
3.79%
7DLGT
3.69%
POD
3.62%
UFGT
3.34%
Other Families
63.37%
More Families (95)
CYP76
134
3.19%
IFS
132
3.15%
F3H
116
2.76%
T3O
97
2.31%
NMT
90
2.14%
LAC
81
1.93%
CAD
74
1.76%
DWF4/CYP90B1
71
1.69%
CODM/T6ODM
70
1.67%
STR
69
1.64%
F3'H/CYP75B
68
1.62%
G8O/G8H
66
1.57%
SMT1/SMT2/SMT3
64
1.53%
CAS
63
1.5%
CSE
61
1.45%
TPS
58
1.38%
BR6OX2/CYP85A2
57
1.36%
H6H
55
1.31%
PYKS
54
1.29%
TRI/TRII
52
1.24%
GES
52
1.24%
T16H
48
1.14%
FNS
45
1.07%
F3'5'H/CYP75A
43
1.02%
HCT
41
0.98%
PAL
39
0.93%
IFR
37
0.88%
BBE
35
0.83%
GS
34
0.81%
CYP90D1
33
0.79%
CYP71
31
0.74%
SGD
30
0.71%
PMT
29
0.69%
IO
28
0.67%
7DLH
28
0.67%
CHS
28
0.67%
RAS
28
0.67%
TAT
26
0.62%
NCS
25
0.6%
F5H/CYP84A
25
0.6%
BR6OX1/CYP85A1
25
0.6%
ANR
21
0.5%
COMT
20
0.48%
CNMT
19
0.45%
CCR
19
0.45%
CPD/CYP90A1
19
0.45%
COR
17
0.41%
SLS
17
0.41%
DFR
17
0.41%
LAMT
16
0.38%
8HGO
14
0.33%
ROT3/CYP90C1
13
0.31%
HPPR
12
0.29%
CYP80B1
10
0.24%
CYP719
10
0.24%
16OMT
10
0.24%
GGPPS
10
0.24%
CPR
9
0.21%
SQE
9
0.21%
ANS/LDOX
8
0.19%
CHI
8
0.19%
CYP51G1
8
0.19%
MPO
7
0.17%
TYDC_DDC
7
0.17%
CCoAOMT
7
0.17%
SQS/FDFT1
7
0.17%
FPPS
7
0.17%
ISY
6
0.14%
AACT
6
0.14%
DXS
6
0.14%
MVD
6
0.14%
PMK
6
0.14%
SMO1/SMO2
5
0.12%
DET2
5
0.12%
MVK
5
0.12%
HMGR
5
0.12%
6OMT_4OMT_SOMT
4
0.1%
FLS
4
0.1%
ODC
3
0.07%
CYP80F1
3
0.07%
TDC
3
0.07%
DWF7
3
0.07%
MDS/IspF
3
0.07%
HMGS
3
0.07%
MCT/IspD
3
0.07%
ADC
2
0.05%
FK
2
0.05%
DWF1
2
0.05%
HDS/IspG
2
0.05%
IDI
2
0.05%
CMK/IspE
2
0.05%
DXR
2
0.05%
CPI1
1
0.02%
HYD1
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 550 | 19 | BAHD (209) | View species results |
| Alkaloid pathway | 417 | 24 | 7DLGT (59) | View species results |
| Phenylpropanoid pathway | 373 | 12 | POD (138) | View species results |
| Flavonoid pathway | 229 | 11 | UFGT (122) | View species results |
| Rosmarinic acid pathway | 115 | 7 | 4CL (37) | View species results |
| Steroid pathway | 113 | 14 | CAS (49) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1447 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 330 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mind04G0006460.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| Mind04G0006470.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| Mind04G0006480.1 | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| Mind04G0007390.1 | Terpenoid | BAHD | low | borderline | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Mind04G0009680.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Mind04G0011800.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Mind04G0011950.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Mind04G0015320.1 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| Mind05G0000180.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind05G0000220.1 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| Mind05G0003780.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Mind05G0004560.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Mind05G0007090.1 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| Mind05G0007460.1 | Terpenoid | BAHD | medium | pass | BAHD__00046__sp_Q5GKZ7_DAT1A_SOYBN |
| Mind05G0008090.1 | Terpenoid | BAHD | medium | pass | BAHD__00046__sp_Q5GKZ7_DAT1A_SOYBN |
| Mind05G0015610.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| Mind06G0000080.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| Mind06G0001610.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| Mind06G0004810.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind06G0008440.1 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| Mind06G0011140.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| Mind07G0001960.1 | Terpenoid | BAHD | low | borderline | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Mind07G0004090.1 | Terpenoid | BAHD | low | borderline | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| Mind07G0005780.1 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| Mind07G0007230.1 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| Mind07G0007630.1 | Terpenoid | BAHD | medium | pass | BAHD__00046__sp_Q5GKZ7_DAT1A_SOYBN |
| Mind07G0007760.1 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| Mind07G0007820.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| Mind07G0009970.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Mind07G0010800.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind07G0012740.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Mind08G0005220.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Mind08G0006090.1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind08G0006190.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind08G0007200.1 | Terpenoid | BAHD | medium | pass | BAHD__00078__sp_Q9LHS7_GPAT7_ARATH |
| Mind08G0007920.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Mind08G0007940.1 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Mind08G0011690.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Mind08G0012080.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind09G0001780.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind09G0001850.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind09G0002480.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind09G0002510.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind09G0002530.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Mind09G0002560.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Mind09G0006530.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Mind09G0006540.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Mind09G0009410.1 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| Mind09G0010100.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Mind09G0011120.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |