Medicago ruthenica (medicago_ruthenica)
Imported from atlas release summary for Medicago ruthenica.
1906
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1906
Candidate Genes
C4H
6.41%
C3'H/CYP98A
6.0%
UGT
5.18%
BAHD
4.97%
7DLGT
4.7%
UFGT
4.49%
IFS
3.97%
POD
3.86%
Other Families
60.41%
More Families (96)
CYP76
181
3.78%
4CL
156
3.26%
T3O
155
3.24%
F3H
145
3.03%
DWF4/CYP90B1
104
2.17%
NMT
101
2.11%
F3'H/CYP75B
98
2.05%
BR6OX2/CYP85A2
92
1.92%
CODM/T6ODM
86
1.8%
STR
78
1.63%
H6H
73
1.52%
SMT1/SMT2/SMT3
68
1.42%
CYP71
59
1.23%
CAD
54
1.13%
TRI/TRII
53
1.11%
CSE
53
1.11%
G8O/G8H
50
1.04%
SGD
49
1.02%
CAS
49
1.02%
COMT
45
0.94%
LAC
43
0.9%
PYKS
42
0.88%
HCT
38
0.79%
RAS
38
0.79%
7DLH
37
0.77%
BBE
37
0.77%
T16H
36
0.75%
CYP90D1
36
0.75%
IFR
34
0.71%
GS
33
0.69%
PMT
33
0.69%
16OMT
32
0.67%
F5H/CYP84A
32
0.67%
ANR
31
0.65%
TPS
30
0.63%
SLS
28
0.58%
GES
27
0.56%
FNS
26
0.54%
IO
25
0.52%
COR
25
0.52%
CYP51G1
25
0.52%
BR6OX1/CYP85A1
25
0.52%
NCS
23
0.48%
F3'5'H/CYP75A
23
0.48%
CCR
22
0.46%
CPD/CYP90A1
20
0.42%
PAL
18
0.38%
ROT3/CYP90C1
18
0.38%
ANS/LDOX
17
0.36%
DFR
15
0.31%
TAT
15
0.31%
LAMT
14
0.29%
8HGO
14
0.29%
CPR
14
0.29%
CNMT
13
0.27%
CYP80B1
13
0.27%
CHS
13
0.27%
ISY
12
0.25%
AACT
12
0.25%
CYP719
10
0.21%
CCoAOMT
10
0.21%
FPPS
10
0.21%
TDC
9
0.19%
HPPR
8
0.17%
SQS/FDFT1
8
0.17%
MPO
7
0.15%
DET2
7
0.15%
GGPPS
7
0.15%
CHI
6
0.13%
DWF1
6
0.13%
MVK
6
0.13%
MVD
5
0.1%
DXS
5
0.1%
HMGR
5
0.1%
TYDC_DDC
4
0.08%
FLS
4
0.08%
SQE
4
0.08%
ODC
3
0.06%
SMO1/SMO2
3
0.06%
CMK/IspE
3
0.06%
MCT/IspD
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
HMGS
2
0.04%
ADC
1
0.02%
XMT_MXMT_DXMT
1
0.02%
6OMT_4OMT_SOMT
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 553 | 20 | UGT (239) | View species results |
| Alkaloid pathway | 434 | 22 | 7DLGT (97) | View species results |
| Phenylpropanoid pathway | 391 | 12 | POD (170) | View species results |
| Flavonoid pathway | 284 | 12 | UFGT (205) | View species results |
| Rosmarinic acid pathway | 150 | 7 | C4H (62) | View species results |
| Steroid pathway | 94 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1851 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mrut03G0005260.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Mrut03G0014130.1 | Terpenoid | CYP76 | low | borderline | CYP76__00021__sp_Q6Z5I7_C76M6_ORYSJ |
| Mrut03G0016300.1 | Terpenoid | CYP76 | low | borderline | CYP76__00016__sp_P0DXJ6_C7631_LOPWI |
| Mrut03G0022110.1 | Terpenoid | CYP76 | low | borderline | CYP76__00017__sp_Q14T82_C76B9_PETHY |
| Mrut03G0022120.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0022170.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0022180.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0022250.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0022260.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0027280.1 | Terpenoid | CYP76 | medium | pass | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0027420.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0027560.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0027570.1 | Terpenoid | CYP76 | low | borderline | CYP76__00015__sp_P0DKI2_C76AN_BETVU |
| Mrut03G0027580.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0027590.1 | Terpenoid | CYP76 | low | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut03G0029100.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Mrut03G0029290.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Mrut03G0033290.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut03G0033330.1 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| Mrut03G0033360.1 | Terpenoid | CYP76 | medium | pass | CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT |
| Mrut03G0053900.1 | Terpenoid | CYP76 | low | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0005360.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Mrut04G0009000.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00014__sp_I3PFJ5_C76AD_BETVU |
| Mrut04G0009010.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Mrut04G0011570.1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Mrut04G0012310.1 | Terpenoid | CYP76 | medium | pass | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Mrut04G0024400.1 | Terpenoid | CYP76 | medium | pass | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Mrut04G0024430.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Mrut04G0028360.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0032080.1 | Terpenoid | CYP76 | medium | pass | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Mrut04G0032560.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Mrut04G0040470.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0040480.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0041770.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0042270.1 | Terpenoid | CYP76 | medium | pass | CYP76__00003__sp_A0A0S1TPC7_C76K6_SALPM |
| Mrut04G0042280.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00013__sp_D1MI46_C76BA_SWEMU |
| Mrut04G0048050.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Mrut04G0050970.1 | Terpenoid | CYP76 | medium | pass | CYP76__00025__sp_W8JIS5_IO_CATRO |
| Mrut04G0052680.1 | Terpenoid | CYP76 | low | borderline | CYP76__00004__sp_A0A0Y0GRS3_C76H3_SALMI |
| Mrut04G0056580.1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Mrut04G0060370.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Mrut04G0060430.1 | Terpenoid | CYP76 | medium | pass | CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF |
| Mrut04G0060440.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC |
| Mrut04G0060450.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Mrut04G0060460.1 | Terpenoid | CYP76 | medium | borderline | CYP76__00022__sp_Q8VWZ7_C76B6_CATRO |
| Mrut05G0004100.1 | Terpenoid | CYP76 | low | borderline | CYP76__00023__sp_S4UX02_CYPH1_SALMI |
| Mrut05G0004380.1 | Terpenoid | CYP76 | low | borderline | CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI |
| Mrut05G0010740.1 | Terpenoid | CYP76 | low | borderline | CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU |
| Mrut05G0014450.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |
| Mrut05G0014470.1 | Terpenoid | CYP76 | medium | pass | CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU |