PlantSME Plant secondary metabolism enzyme database

Medicago ruthenica (medicago_ruthenica)

Imported from atlas release summary for Medicago ruthenica.

1906
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 20 UGT (239) View species results
Alkaloid pathway 434 22 7DLGT (97) View species results
Phenylpropanoid pathway 391 12 POD (170) View species results
Flavonoid pathway 284 12 UFGT (205) View species results
Rosmarinic acid pathway 150 7 C4H (62) View species results
Steroid pathway 94 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1851 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 314 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
Mrut01G0001140.1 Alkaloid PYKS low borderline
Mrut01G0004620.1 Alkaloid PYKS low borderline
Mrut01G0011230.1 Alkaloid PYKS high pass
Mrut01G0025990.1 Alkaloid PYKS low borderline
Mrut01G0051160.1 Alkaloid PYKS low borderline
Mrut02G0001600.1 Alkaloid PYKS low borderline
Mrut02G0003860.1 Alkaloid PYKS low borderline
Mrut02G0004520.1 Alkaloid PYKS low borderline
Mrut02G0018060.1 Alkaloid PYKS low borderline
Mrut02G0018790.1 Alkaloid PYKS low borderline
Mrut02G0048170.1 Alkaloid PYKS low borderline
Mrut02G0054430.1 Alkaloid PYKS low borderline
Mrut03G0031290.1 Alkaloid PYKS low borderline
Mrut03G0040340.1 Alkaloid PYKS medium pass
Mrut03G0040350.1 Alkaloid PYKS medium pass
Mrut03G0042330.1 Alkaloid PYKS high pass
Mrut03G0042360.1 Alkaloid PYKS high pass
Mrut03G0054350.1 Alkaloid PYKS low borderline
Mrut04G0024060.1 Alkaloid PYKS low borderline
Mrut04G0024080.1 Alkaloid PYKS low borderline
Mrut04G0024090.1 Alkaloid PYKS low borderline
Mrut04G0024140.1 Alkaloid PYKS low borderline
Mrut04G0024200.1 Alkaloid PYKS low borderline
Mrut04G0027730.1 Alkaloid PYKS low borderline
Mrut04G0031130.1 Alkaloid PYKS high pass
Mrut04G0032930.1 Alkaloid PYKS low borderline
Mrut04G0033620.1 Alkaloid PYKS high pass
Mrut05G0023600.1 Alkaloid PYKS low borderline
Mrut05G0035350.1 Alkaloid PYKS low borderline
Mrut06G0006550.1 Alkaloid PYKS low borderline
Mrut06G0014380.1 Alkaloid PYKS low borderline
Mrut06G0020330.1 Alkaloid PYKS low borderline
Mrut06G0029650.1 Alkaloid PYKS low borderline
Mrut07G0022180.1 Alkaloid PYKS high pass
Mrut07G0022240.1 Alkaloid PYKS high pass
Mrutctg16700007390.1 Alkaloid PYKS high pass
Mrutctg16700007410.1 Alkaloid PYKS high pass
Mrutctg18640022040.1 Alkaloid PYKS low borderline
Mrutctg18640022070.1 Alkaloid PYKS low borderline
Mrutctg18760022590.1 Alkaloid PYKS low borderline
Mrutctg20580035130.1 Alkaloid PYKS low borderline
Mrutctg21160040830.1 Alkaloid PYKS low borderline