Medicago ruthenica (medicago_ruthenica)
Imported from atlas release summary for Medicago ruthenica.
1906
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1906
Candidate Genes
C4H
6.41%
C3'H/CYP98A
6.0%
UGT
5.18%
BAHD
4.97%
7DLGT
4.7%
UFGT
4.49%
IFS
3.97%
POD
3.86%
Other Families
60.41%
More Families (96)
CYP76
181
3.78%
4CL
156
3.26%
T3O
155
3.24%
F3H
145
3.03%
DWF4/CYP90B1
104
2.17%
NMT
101
2.11%
F3'H/CYP75B
98
2.05%
BR6OX2/CYP85A2
92
1.92%
CODM/T6ODM
86
1.8%
STR
78
1.63%
H6H
73
1.52%
SMT1/SMT2/SMT3
68
1.42%
CYP71
59
1.23%
CAD
54
1.13%
TRI/TRII
53
1.11%
CSE
53
1.11%
G8O/G8H
50
1.04%
SGD
49
1.02%
CAS
49
1.02%
COMT
45
0.94%
LAC
43
0.9%
PYKS
42
0.88%
HCT
38
0.79%
RAS
38
0.79%
7DLH
37
0.77%
BBE
37
0.77%
T16H
36
0.75%
CYP90D1
36
0.75%
IFR
34
0.71%
GS
33
0.69%
PMT
33
0.69%
16OMT
32
0.67%
F5H/CYP84A
32
0.67%
ANR
31
0.65%
TPS
30
0.63%
SLS
28
0.58%
GES
27
0.56%
FNS
26
0.54%
IO
25
0.52%
COR
25
0.52%
CYP51G1
25
0.52%
BR6OX1/CYP85A1
25
0.52%
NCS
23
0.48%
F3'5'H/CYP75A
23
0.48%
CCR
22
0.46%
CPD/CYP90A1
20
0.42%
PAL
18
0.38%
ROT3/CYP90C1
18
0.38%
ANS/LDOX
17
0.36%
DFR
15
0.31%
TAT
15
0.31%
LAMT
14
0.29%
8HGO
14
0.29%
CPR
14
0.29%
CNMT
13
0.27%
CYP80B1
13
0.27%
CHS
13
0.27%
ISY
12
0.25%
AACT
12
0.25%
CYP719
10
0.21%
CCoAOMT
10
0.21%
FPPS
10
0.21%
TDC
9
0.19%
HPPR
8
0.17%
SQS/FDFT1
8
0.17%
MPO
7
0.15%
DET2
7
0.15%
GGPPS
7
0.15%
CHI
6
0.13%
DWF1
6
0.13%
MVK
6
0.13%
MVD
5
0.1%
DXS
5
0.1%
HMGR
5
0.1%
TYDC_DDC
4
0.08%
FLS
4
0.08%
SQE
4
0.08%
ODC
3
0.06%
SMO1/SMO2
3
0.06%
CMK/IspE
3
0.06%
MCT/IspD
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
HMGS
2
0.04%
ADC
1
0.02%
XMT_MXMT_DXMT
1
0.02%
6OMT_4OMT_SOMT
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
DWF7
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 553 | 20 | UGT (239) | View species results |
| Alkaloid pathway | 434 | 22 | 7DLGT (97) | View species results |
| Phenylpropanoid pathway | 391 | 12 | POD (170) | View species results |
| Flavonoid pathway | 284 | 12 | UFGT (205) | View species results |
| Rosmarinic acid pathway | 150 | 7 | C4H (62) | View species results |
| Steroid pathway | 94 | 12 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1851 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 314 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mrut04G0036130.1 | Alkaloid | NMT | medium | pass | NMT__00030__sp_Q43088_RBCMT_PEA |
| Mrut04G0059310.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| Mrut04G0060870.1 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Mrut05G0000110.1 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| Mrut05G0003140.1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Mrut05G0025790.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mrut05G0045830.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrut05G0046840.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Mrut05G0049870.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mrut06G0000890.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| Mrut06G0007060.1 | Alkaloid | NMT | medium | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| Mrut06G0008870.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Mrut06G0022790.1 | Alkaloid | NMT | low | borderline | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Mrut07G0004930.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Mrut07G0008440.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Mrut07G0011990.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Mrut07G0018720.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Mrut07G0022020.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Mrut07G0026890.1 | Alkaloid | NMT | low | borderline | NMT__00030__sp_Q43088_RBCMT_PEA |
| Mrut07G0027220.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| Mrut07G0038770.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Mrut07G0038970.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| Mrut07G0053420.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrut07G0053440.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrut07G0053470.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrut08G0012560.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mrut08G0018760.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Mrut08G0021800.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mrut08G0027750.1 | Alkaloid | NMT | medium | borderline | NMT__00065__sp_Q9SEH7_PMT2_TOBAC |
| Mrut08G0029630.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrut08G0029640.1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrut08G0030910.1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| Mrut08G0030920.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Mrut08G0031590.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Mrut08G0034160.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mrut08G0035230.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mrut08G0035850.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrut08G0035870.1 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrut08G0035880.1 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrut08G0035910.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrut08G0039240.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mrut08G0040630.1 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Mrut08G0050000.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Mrut08G0059120.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mrutctg19280025390.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrutctg19810029240.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrutctg20010030750.1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| Mrutctg20890037840.1 | Alkaloid | NMT | low | borderline | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Mrutctg20890037850.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Mrutctg21010038490.1 | Alkaloid | NMT | medium | borderline | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |