Megadenia pygmaea (megadenia_pygmaea)
Imported from atlas release summary for Megadenia pygmaea.
1415
Candidate Protein Records
1115
Pathway-Level Records
2754
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2754
Family-Level Calls
BAHD
6.46%
C3'H/CYP98A
5.95%
C4H
5.59%
POD
4.68%
4CL
4.25%
CYP76
4.21%
UGT
3.52%
IFS
3.38%
Other Families
61.95%
More Families (95)
7DLGT
91
3.3%
UFGT
91
3.3%
NMT
81
2.94%
T3O
74
2.69%
F3H
70
2.54%
DWF4/CYP90B1
64
2.32%
BR6OX2/CYP85A2
55
2.0%
F3'H/CYP75B
54
1.96%
STR
52
1.89%
SMT1/SMT2/SMT3
45
1.63%
CODM/T6ODM
43
1.56%
SGD
41
1.49%
CSE
41
1.49%
CYP71
41
1.49%
H6H
39
1.42%
TRI/TRII
31
1.13%
IFR
31
1.13%
G8O/G8H
28
1.02%
PYKS
27
0.98%
FNS
27
0.98%
IO
26
0.94%
CAD
26
0.94%
BBE
25
0.91%
CYP90D1
25
0.91%
PAL
24
0.87%
LAC
24
0.87%
T16H
23
0.84%
SLS
22
0.8%
TPS
22
0.8%
F3'5'H/CYP75A
21
0.76%
F5H/CYP84A
21
0.76%
CAS
21
0.76%
ANR
20
0.73%
CCR
19
0.69%
GS
17
0.62%
RAS
17
0.62%
GES
16
0.58%
COMT
16
0.58%
TAT
15
0.54%
CPD/CYP90A1
15
0.54%
7DLH
14
0.51%
8HGO
11
0.4%
BR6OX1/CYP85A1
11
0.4%
GGPPS
11
0.4%
16OMT
10
0.36%
HCT
10
0.36%
ANS/LDOX
9
0.33%
FPPS
9
0.33%
PMT
8
0.29%
NCS
8
0.29%
CNMT
8
0.29%
COR
8
0.29%
LAMT
8
0.29%
CPR
8
0.29%
CYP51G1
8
0.29%
AACT
7
0.25%
ROT3/CYP90C1
6
0.22%
SMO1/SMO2
6
0.22%
SQE
6
0.22%
MPO
5
0.18%
CYP80B1
5
0.18%
CCoAOMT
5
0.18%
CYP80F1
4
0.15%
XMT_MXMT_DXMT
4
0.15%
CYP719
4
0.15%
CHS
4
0.15%
CHI
4
0.15%
DFR
4
0.15%
DET2
4
0.15%
MVD
4
0.15%
CMK/IspE
4
0.15%
DXS
4
0.15%
DWF5
3
0.11%
HYD1
3
0.11%
DWF7
3
0.11%
SQS/FDFT1
3
0.11%
MCT/IspD
3
0.11%
MVK
3
0.11%
MDS/IspF
3
0.11%
TDC
2
0.07%
ADC
2
0.07%
TYDC_DDC
2
0.07%
ISY
2
0.07%
HPPR
2
0.07%
IDI
2
0.07%
HMGR
2
0.07%
ODC
1
0.04%
FLS
1
0.04%
CPI1
1
0.04%
FK
1
0.04%
DWF1
1
0.04%
PMK
1
0.04%
HDR/IspH
1
0.04%
HDS/IspG
1
0.04%
HMGS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 338 | 18 | BAHD (142) | View species results |
| Phenylpropanoid pathway | 254 | 11 | POD (116) | View species results |
| Alkaloid pathway | 235 | 19 | NMT (50) | View species results |
| Flavonoid pathway | 139 | 9 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (29) | View species results |
| Steroid pathway | 67 | 12 | SMT1/SMT2/SMT3 (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1048 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| MpygGWHANWB000000060244960.1 | Alkaloid | NMT | medium | pass |
| MpygGWHANWB000000060245560.1 | Alkaloid | NMT | low | borderline |
| MpygGWHANWB000000060247670.1 | Alkaloid | NMT | low | borderline |
| MpygGWHANWB000001160250780.1 | Alkaloid | NMT | medium | borderline |
| MpygGWHANWB000004360253700.1 | Alkaloid | NMT | medium | pass |
| MpygGWHANWB000000060237960.1 | Alkaloid | ODC | low | borderline |
| MpygGWHANWB000000010000070.1 | Alkaloid | PMT | low | borderline |
| MpygGWHANWB000000010021250.1 | Alkaloid | PMT | medium | borderline |
| MpygGWHANWB000000020066180.1 | Alkaloid | PMT | medium | pass |
| MpygGWHANWB000000030085770.1 | Alkaloid | PMT | low | borderline |
| MpygGWHANWB000000040123400.1 | Alkaloid | PMT | medium | pass |
| MpygGWHANWB000000040133120.1 | Alkaloid | PMT | medium | borderline |
| MpygGWHANWB000000050162260.1 | Alkaloid | PMT | low | borderline |
| MpygGWHANWB000000050192790.1 | Alkaloid | PMT | low | borderline |
| MpygGWHANWB000000010019750.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010024740.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010035680.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010039060.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010040890.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010041710.1 | Alkaloid | PYKS | medium | pass |
| MpygGWHANWB000000020044220.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000020062540.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000020065830.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000030075900.1 | Alkaloid | PYKS | high | pass |
| MpygGWHANWB000000030076190.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000030076200.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000030076490.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000040110340.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000040118330.1 | Alkaloid | PYKS | high | pass |
| MpygGWHANWB000000040147500.1 | Alkaloid | PYKS | high | pass |
| MpygGWHANWB000000050154550.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000050170930.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000050183750.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060199120.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060202740.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060205180.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060212940.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060213100.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060220020.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060220050.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000060220760.1 | Alkaloid | PYKS | low | borderline |
| MpygGWHANWB000000010003040.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000010003320.1 | Alkaloid | SGD | low | borderline |
| MpygGWHANWB000000010003330.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000010009170.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000010019550.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000010020200.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000020046440.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000020046450.1 | Alkaloid | SGD | medium | pass |
| MpygGWHANWB000000020046470.1 | Alkaloid | SGD | medium | pass |