Melaleuca alternifolia (melaleuca_alternifolia)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.87% Alkaloid pathway 22.96% Phenylpropanoid pathway 20.3% Flavonoid pathway 13.48% Rosmarinic acid pathway 8.26% Steroid pathway 5.12%

Family Distribution

2069 Candidate Genes

C4H 6.2% C3'H/CYP98A 6.14% BAHD 5.47% UGT 4.41% 7DLGT 4.25% IFS 4.23% UFGT 4.19% CYP76 4.02%

Other Families 61.1%

More Families (96)

POD 189 3.8% T3O 186 3.74% F3H 117 2.35% 4CL 114 2.29% CAD 111 2.23% DWF4/CYP90B1 111 2.23% GES 101 2.03% STR 94 1.89% F3'H/CYP75B 93 1.87% TPS 92 1.85% BR6OX2/CYP85A2 82 1.65% CAS 81 1.63% NMT 71 1.43% CODM/T6ODM 69 1.39% H6H 65 1.31% LAC 64 1.29% SMT1/SMT2/SMT3 60 1.21% CYP90D1 56 1.13% COMT 52 1.05% HCT 50 1.01% IFR 49 0.99% TRI/TRII 48 0.97% GS 45 0.91% CYP71 45 0.91% IO 44 0.89% CSE 43 0.87% TAT 43 0.87% RAS 41 0.83% G8O/G8H 39 0.78% 16OMT 38 0.76% PMT 35 0.7% PYKS 34 0.68% 7DLH 33 0.66% COR 31 0.62% CPD/CYP90A1 31 0.62% SGD 30 0.6% T16H 30 0.6% LAMT 30 0.6% SLS 30 0.6% BBE 29 0.58% ANR 29 0.58% CYP51G1 29 0.58% FNS 28 0.56% F3'5'H/CYP75A 28 0.56% NCS 24 0.48% CCR 20 0.4% 8HGO 16 0.32% CHS 16 0.32% BR6OX1/CYP85A1 16 0.32% PAL 15 0.3% F5H/CYP84A 14 0.28% SQS/FDFT1 14 0.28% ROT3/CYP90C1 11 0.22% CCoAOMT 10 0.2% CNMT 9 0.18% TYDC_DDC 9 0.18% DFR 9 0.18% GGPPS 9 0.18% AACT 9 0.18% HMGR 9 0.18% CYP719 8 0.16% SQE 8 0.16% MPO 7 0.14% HPPR 7 0.14% ANS/LDOX 6 0.12% HMGS 6 0.12% MVD 5 0.1% CYP80B1 4 0.08% CPR 4 0.08% FPPS 4 0.08% 6OMT_4OMT_SOMT 3 0.06% CHI 3 0.06% HYD1 3 0.06% SMO1/SMO2 3 0.06% DET2 3 0.06% DXS 3 0.06% XMT_MXMT_DXMT 2 0.04% ADC 2 0.04% TDC 2 0.04% ISY 2 0.04% PMK 2 0.04% MCT/IspD 2 0.04% IDI 2 0.04% MVK 2 0.04% CMK/IspE 2 0.04% CYP80F1 1 0.02% FLS 1 0.02% CPI1 1 0.02% DWF7 1 0.02% FK 1 0.02% DWF1 1 0.02% DWF5 1 0.02% DXR 1 0.02% HDS/IspG 1 0.02% HDR/IspH 1 0.02% MDS/IspF 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	618	19	UGT (204)	View species results
Alkaloid pathway	475	21	7DLGT (104)	View species results
Phenylpropanoid pathway	420	11	POD (176)	View species results
Flavonoid pathway	279	10	UFGT (196)	View species results
Rosmarinic acid pathway	171	7	C4H (86)	View species results
Steroid pathway	106	13	SMT1/SMT2/SMT3 (41)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1914	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	363	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
melaleuca_alternifolia_scf7180000036926_gene_466	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
melaleuca_alternifolia_scf7180000036926_gene_561	Alkaloid	NMT	medium	borderline	NMT__00010__sp_A4GE70_DXMT1_COFCA
melaleuca_alternifolia_scf7180000037096_gene_176	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
melaleuca_alternifolia_scf7180000037096_gene_51	Alkaloid	NMT	medium	pass	NMT__00028__sp_Q2LAE1_ASHH2_ARATH
melaleuca_alternifolia_scf7180000037301_gene_716	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
melaleuca_alternifolia_scf7180000037303_gene_967	Alkaloid	NMT	medium	borderline	NMT__00062__sp_Q9SCP7_NAMT1_ARATH
melaleuca_alternifolia_scf7180000037303_gene_971	Alkaloid	NMT	medium	pass	NMT__00018__sp_I1M2U5_NAMT1_SOYBN
melaleuca_alternifolia_scf7180000037361_gene_103	Alkaloid	NMT	low	borderline	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
melaleuca_alternifolia_scf7180000037782_gene_271	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
melaleuca_alternifolia_scf7180000037782_gene_310	Alkaloid	NMT	medium	pass	NMT__00019__sp_O22781_SUVH2_ARATH
melaleuca_alternifolia_scf7180000038711_gene_218	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
melaleuca_alternifolia_scf7180000039061_gene_215	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
melaleuca_alternifolia_scf7180000039073_gene_24	Alkaloid	NMT	medium	pass	NMT__00055__sp_Q9FNC7_SUVR2_ARATH
melaleuca_alternifolia_scf7180000039075_gene_120	Alkaloid	NMT	low	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
melaleuca_alternifolia_scf7180000039075_gene_326	Alkaloid	NMT	low	borderline	NMT__00056__sp_Q9FNE9_ATXR6_ARATH
melaleuca_alternifolia_scf7180000039087_gene_149	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
melaleuca_alternifolia_scf7180000039087_gene_757	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
melaleuca_alternifolia_scf7180000039087_gene_758	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
melaleuca_alternifolia_scf7180000039087_gene_759	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
melaleuca_alternifolia_scf7180000039141_gene_1099	Alkaloid	NMT	medium	pass	NMT__00048__sp_Q8W595_SUVR4_ARATH
melaleuca_alternifolia_scf7180000039157_gene_21	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH