Melaleuca alternifolia (melaleuca_alternifolia)
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Imported from atlas release summary for Melaleuca alternifolia.
2069
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2069
Candidate Genes
C4H
6.2%
C3'H/CYP98A
6.14%
BAHD
5.47%
UGT
4.41%
7DLGT
4.25%
IFS
4.23%
UFGT
4.19%
CYP76
4.02%
Other Families
61.1%
More Families (96)
POD
189
3.8%
T3O
186
3.74%
F3H
117
2.35%
4CL
114
2.29%
CAD
111
2.23%
DWF4/CYP90B1
111
2.23%
GES
101
2.03%
STR
94
1.89%
F3'H/CYP75B
93
1.87%
TPS
92
1.85%
BR6OX2/CYP85A2
82
1.65%
CAS
81
1.63%
NMT
71
1.43%
CODM/T6ODM
69
1.39%
H6H
65
1.31%
LAC
64
1.29%
SMT1/SMT2/SMT3
60
1.21%
CYP90D1
56
1.13%
COMT
52
1.05%
HCT
50
1.01%
IFR
49
0.99%
TRI/TRII
48
0.97%
GS
45
0.91%
CYP71
45
0.91%
IO
44
0.89%
CSE
43
0.87%
TAT
43
0.87%
RAS
41
0.83%
G8O/G8H
39
0.78%
16OMT
38
0.76%
PMT
35
0.7%
PYKS
34
0.68%
7DLH
33
0.66%
COR
31
0.62%
CPD/CYP90A1
31
0.62%
SGD
30
0.6%
T16H
30
0.6%
LAMT
30
0.6%
SLS
30
0.6%
BBE
29
0.58%
ANR
29
0.58%
CYP51G1
29
0.58%
FNS
28
0.56%
F3'5'H/CYP75A
28
0.56%
NCS
24
0.48%
CCR
20
0.4%
8HGO
16
0.32%
CHS
16
0.32%
BR6OX1/CYP85A1
16
0.32%
PAL
15
0.3%
F5H/CYP84A
14
0.28%
SQS/FDFT1
14
0.28%
ROT3/CYP90C1
11
0.22%
CCoAOMT
10
0.2%
CNMT
9
0.18%
TYDC_DDC
9
0.18%
DFR
9
0.18%
GGPPS
9
0.18%
AACT
9
0.18%
HMGR
9
0.18%
CYP719
8
0.16%
SQE
8
0.16%
MPO
7
0.14%
HPPR
7
0.14%
ANS/LDOX
6
0.12%
HMGS
6
0.12%
MVD
5
0.1%
CYP80B1
4
0.08%
CPR
4
0.08%
FPPS
4
0.08%
6OMT_4OMT_SOMT
3
0.06%
CHI
3
0.06%
HYD1
3
0.06%
SMO1/SMO2
3
0.06%
DET2
3
0.06%
DXS
3
0.06%
XMT_MXMT_DXMT
2
0.04%
ADC
2
0.04%
TDC
2
0.04%
ISY
2
0.04%
PMK
2
0.04%
MCT/IspD
2
0.04%
IDI
2
0.04%
MVK
2
0.04%
CMK/IspE
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDS/IspG
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 618 | 19 | UGT (204) | View species results |
| Alkaloid pathway | 475 | 21 | 7DLGT (104) | View species results |
| Phenylpropanoid pathway | 420 | 11 | POD (176) | View species results |
| Flavonoid pathway | 279 | 10 | UFGT (196) | View species results |
| Rosmarinic acid pathway | 171 | 7 | C4H (86) | View species results |
| Steroid pathway | 106 | 13 | SMT1/SMT2/SMT3 (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1914 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 363 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| melaleuca_alternifolia_scf7180000028686_gene_311 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| melaleuca_alternifolia_scf7180000028686_gene_312 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| melaleuca_alternifolia_scf7180000028686_gene_57 | Terpenoid | UGT | low | borderline | UGT__00045__sp_K4GKX2_73C10_BARVU |
| melaleuca_alternifolia_scf7180000028826_gene_2 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| melaleuca_alternifolia_scf7180000028826_gene_3 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| melaleuca_alternifolia_scf7180000028826_gene_6 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| melaleuca_alternifolia_scf7180000028999_gene_279 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| melaleuca_alternifolia_scf7180000029102_gene_235 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| melaleuca_alternifolia_scf7180000029144_gene_232 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| melaleuca_alternifolia_scf7180000029144_gene_233 | Terpenoid | UGT | medium | pass | UGT__00031__sp_F8WKW0_UGT1_GARJA |
| melaleuca_alternifolia_scf7180000029144_gene_237 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| melaleuca_alternifolia_scf7180000029144_gene_243 | Terpenoid | UGT | medium | pass | UGT__00031__sp_F8WKW0_UGT1_GARJA |
| melaleuca_alternifolia_scf7180000029144_gene_256 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| melaleuca_alternifolia_scf7180000029144_gene_262 | Terpenoid | UGT | medium | pass | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| melaleuca_alternifolia_scf7180000029144_gene_486 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| melaleuca_alternifolia_scf7180000029144_gene_487 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| melaleuca_alternifolia_scf7180000029175_gene_5 | Terpenoid | UGT | low | borderline | UGT__00081__sp_Q9C768_U76B1_ARATH |
| melaleuca_alternifolia_scf7180000029175_gene_7 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| melaleuca_alternifolia_scf7180000029212_gene_306 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| melaleuca_alternifolia_scf7180000029212_gene_307 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| melaleuca_alternifolia_scf7180000029212_gene_308 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| melaleuca_alternifolia_scf7180000029217_gene_11 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| melaleuca_alternifolia_scf7180000029217_gene_12 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| melaleuca_alternifolia_scf7180000029240_gene_206 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000029240_gene_207 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000029240_gene_208 | Terpenoid | UGT | low | borderline | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000029240_gene_249 | Terpenoid | UGT | medium | pass | UGT__00027__sp_D3UAG0_U71K1_MALDO |
| melaleuca_alternifolia_scf7180000029240_gene_250 | Terpenoid | UGT | medium | pass | UGT__00027__sp_D3UAG0_U71K1_MALDO |
| melaleuca_alternifolia_scf7180000029240_gene_289 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| melaleuca_alternifolia_scf7180000029660_gene_100 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| melaleuca_alternifolia_scf7180000029660_gene_103 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| melaleuca_alternifolia_scf7180000029660_gene_104 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_30 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_31 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_33 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| melaleuca_alternifolia_scf7180000030463_gene_106 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| melaleuca_alternifolia_scf7180000030551_gene_54 | Terpenoid | UGT | medium | pass | UGT__00023__sp_B3TKC8_88F1G_MALDO |
| melaleuca_alternifolia_scf7180000036271_gene_137 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| melaleuca_alternifolia_scf7180000036271_gene_138 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| melaleuca_alternifolia_scf7180000036282_gene_202 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000036282_gene_204 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| melaleuca_alternifolia_scf7180000036282_gene_207 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| melaleuca_alternifolia_scf7180000036282_gene_208 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| melaleuca_alternifolia_scf7180000036283_gene_146 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| melaleuca_alternifolia_scf7180000036283_gene_147 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| melaleuca_alternifolia_scf7180000036283_gene_148 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| melaleuca_alternifolia_scf7180000036293_gene_106 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| melaleuca_alternifolia_scf7180000036293_gene_50 | Terpenoid | UGT | medium | pass | UGT__00011__sp_A0A0K0PVW1_UGT10_PANGI |
| melaleuca_alternifolia_scf7180000036318_gene_13 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| melaleuca_alternifolia_scf7180000036318_gene_14 | Terpenoid | UGT | medium | pass | UGT__00018__sp_A0A224AM54_708G1_CITJP |