Melaleuca alternifolia (melaleuca_alternifolia)
/
Imported from atlas release summary for Melaleuca alternifolia.
2069
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2069
Candidate Genes
C4H
6.2%
C3'H/CYP98A
6.14%
BAHD
5.47%
UGT
4.41%
7DLGT
4.25%
IFS
4.23%
UFGT
4.19%
CYP76
4.02%
Other Families
61.1%
More Families (96)
POD
189
3.8%
T3O
186
3.74%
F3H
117
2.35%
4CL
114
2.29%
CAD
111
2.23%
DWF4/CYP90B1
111
2.23%
GES
101
2.03%
STR
94
1.89%
F3'H/CYP75B
93
1.87%
TPS
92
1.85%
BR6OX2/CYP85A2
82
1.65%
CAS
81
1.63%
NMT
71
1.43%
CODM/T6ODM
69
1.39%
H6H
65
1.31%
LAC
64
1.29%
SMT1/SMT2/SMT3
60
1.21%
CYP90D1
56
1.13%
COMT
52
1.05%
HCT
50
1.01%
IFR
49
0.99%
TRI/TRII
48
0.97%
GS
45
0.91%
CYP71
45
0.91%
IO
44
0.89%
CSE
43
0.87%
TAT
43
0.87%
RAS
41
0.83%
G8O/G8H
39
0.78%
16OMT
38
0.76%
PMT
35
0.7%
PYKS
34
0.68%
7DLH
33
0.66%
COR
31
0.62%
CPD/CYP90A1
31
0.62%
SGD
30
0.6%
T16H
30
0.6%
LAMT
30
0.6%
SLS
30
0.6%
BBE
29
0.58%
ANR
29
0.58%
CYP51G1
29
0.58%
FNS
28
0.56%
F3'5'H/CYP75A
28
0.56%
NCS
24
0.48%
CCR
20
0.4%
8HGO
16
0.32%
CHS
16
0.32%
BR6OX1/CYP85A1
16
0.32%
PAL
15
0.3%
F5H/CYP84A
14
0.28%
SQS/FDFT1
14
0.28%
ROT3/CYP90C1
11
0.22%
CCoAOMT
10
0.2%
CNMT
9
0.18%
TYDC_DDC
9
0.18%
DFR
9
0.18%
GGPPS
9
0.18%
AACT
9
0.18%
HMGR
9
0.18%
CYP719
8
0.16%
SQE
8
0.16%
MPO
7
0.14%
HPPR
7
0.14%
ANS/LDOX
6
0.12%
HMGS
6
0.12%
MVD
5
0.1%
CYP80B1
4
0.08%
CPR
4
0.08%
FPPS
4
0.08%
6OMT_4OMT_SOMT
3
0.06%
CHI
3
0.06%
HYD1
3
0.06%
SMO1/SMO2
3
0.06%
DET2
3
0.06%
DXS
3
0.06%
XMT_MXMT_DXMT
2
0.04%
ADC
2
0.04%
TDC
2
0.04%
ISY
2
0.04%
PMK
2
0.04%
MCT/IspD
2
0.04%
IDI
2
0.04%
MVK
2
0.04%
CMK/IspE
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
DWF1
1
0.02%
DWF5
1
0.02%
DXR
1
0.02%
HDS/IspG
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 618 | 19 | UGT (204) | View species results |
| Alkaloid pathway | 475 | 21 | 7DLGT (104) | View species results |
| Phenylpropanoid pathway | 420 | 11 | POD (176) | View species results |
| Flavonoid pathway | 279 | 10 | UFGT (196) | View species results |
| Rosmarinic acid pathway | 171 | 7 | C4H (86) | View species results |
| Steroid pathway | 106 | 13 | SMT1/SMT2/SMT3 (41) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1914 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 363 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| melaleuca_alternifolia_scf7180000028570_gene_331 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| melaleuca_alternifolia_scf7180000028570_gene_467 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| melaleuca_alternifolia_scf7180000028647_gene_181 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000028686_gene_218 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| melaleuca_alternifolia_scf7180000028686_gene_287 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| melaleuca_alternifolia_scf7180000028710_gene_54 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| melaleuca_alternifolia_scf7180000028999_gene_121 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| melaleuca_alternifolia_scf7180000029102_gene_299 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| melaleuca_alternifolia_scf7180000029102_gene_33 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| melaleuca_alternifolia_scf7180000029144_gene_177 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| melaleuca_alternifolia_scf7180000029212_gene_182 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| melaleuca_alternifolia_scf7180000029212_gene_228 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| melaleuca_alternifolia_scf7180000029212_gene_275 | Terpenoid | BAHD | low | borderline | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| melaleuca_alternifolia_scf7180000029212_gene_296 | Terpenoid | BAHD | medium | pass | BAHD__00050__sp_Q6DR03_ZDHC3_ARATH |
| melaleuca_alternifolia_scf7180000029284_gene_8 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| melaleuca_alternifolia_scf7180000029399_gene_62 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_64 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_65 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_72 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_73 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_74 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_75 | Terpenoid | BAHD | low | borderline | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| melaleuca_alternifolia_scf7180000029399_gene_80 | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| melaleuca_alternifolia_scf7180000029399_gene_86 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| melaleuca_alternifolia_scf7180000029487_gene_120 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| melaleuca_alternifolia_scf7180000029487_gene_161 | Terpenoid | BAHD | low | borderline | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| melaleuca_alternifolia_scf7180000029487_gene_163 | Terpenoid | BAHD | medium | pass | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| melaleuca_alternifolia_scf7180000029830_gene_74 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029830_gene_75 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029830_gene_76 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029830_gene_81 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029830_gene_83 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029832_gene_9 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_108 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_132 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_96 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_97 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| melaleuca_alternifolia_scf7180000029886_gene_99 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| melaleuca_alternifolia_scf7180000030219_gene_32 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030219_gene_45 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030219_gene_59 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030219_gene_60 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030219_gene_67 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030332_gene_1 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030332_gene_10 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| melaleuca_alternifolia_scf7180000030423_gene_123 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| melaleuca_alternifolia_scf7180000030423_gene_13 | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| melaleuca_alternifolia_scf7180000030423_gene_235 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| melaleuca_alternifolia_scf7180000030423_gene_236 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| melaleuca_alternifolia_scf7180000030524_gene_31 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |