PlantSME Plant secondary metabolism enzyme database

Mesoptychia sp (mesoptychia_sp)

Imported from atlas release summary for Mesoptychia sp.

849
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 27.44% Phenylpropanoid pathway 22.03% Terpenoid pathway 19.67% Flavonoid pathway 14.25% Rosmarinic acid pathway 11.54% Steroid pathway 5.06%
Family Distribution
C4H 6.66% 4CL 6.4% C3'H/CYP98A 6.07% CYP76 4.41% IFS 3.9% BAHD 3.71% GS 3.57% TRI/TRII 2.83%
Other Families 62.45%
More Families (97)
DWF4/CYP90B1 75 2.76% F3H 74 2.72% T3O 73 2.68% POD 72 2.65% STR 70 2.57% BR6OX2/CYP85A2 69 2.54% IFR 65 2.39% NMT 58 2.13% UFGT 56 2.06% UGT 52 1.91% 7DLGT 50 1.84% CAD 50 1.84% H6H 49 1.8% F3'H/CYP75B 49 1.8% G8O/G8H 36 1.32% T16H 32 1.18% COMT 31 1.14% PAL 30 1.1% IO 27 0.99% FNS 27 0.99% HCT 27 0.99% SMT1/SMT2/SMT3 27 0.99% BR6OX1/CYP85A1 26 0.96% PYKS 25 0.92% RAS 25 0.92% CODM/T6ODM 23 0.85% LAMT 20 0.74% CYP719 19 0.7% ANR 19 0.7% CHS 19 0.7% F3'5'H/CYP75A 19 0.7% NCS 18 0.66% SLS 16 0.59% CPR 15 0.55% CAS 15 0.55% CPD/CYP90A1 15 0.55% TPS 15 0.55% SGD 14 0.51% CNMT 14 0.51% COR 14 0.51% CSE 14 0.51% CCR 12 0.44% LAC 12 0.44% CYP71 12 0.44% BBE 11 0.4% F5H/CYP84A 11 0.4% 16OMT 10 0.37% DFR 10 0.37% ANS/LDOX 10 0.37% CYP80B1 8 0.29% TAT 8 0.29% GGPPS 8 0.29% 7DLH 7 0.26% ISY 7 0.26% PMT 6 0.22% CYP90D1 6 0.22% FPPS 6 0.22% XMT_MXMT_DXMT 5 0.18% 8HGO 5 0.18% CYP80F1 5 0.18% GES 5 0.18% HPPR 5 0.18% ROT3/CYP90C1 5 0.18% MVK 5 0.18% AACT 5 0.18% MPO 4 0.15% ADC 4 0.15% TDC 4 0.15% CCoAOMT 4 0.15% IDI 4 0.15% 6OMT_4OMT_SOMT 3 0.11% CHI 3 0.11% DWF1 3 0.11% SQS/FDFT1 3 0.11% DET2 3 0.11% GPPS 3 0.11% DXS 3 0.11% MCT/IspD 3 0.11% CMK/IspE 3 0.11% ODC 2 0.07% FLS 2 0.07% FK 2 0.07% SMO1/SMO2 2 0.07% MVD 2 0.07% TYDC_DDC 1 0.04% DWF5 1 0.04% CYP51G1 1 0.04% DWF7 1 0.04% HYD1 1 0.04% SQE 1 0.04% HDS/IspG 1 0.04% HDR/IspH 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04% PMK 1 0.04% HMGR 1 0.04% DXR 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 233 19 TRI/TRII (40) View species results
Phenylpropanoid pathway 187 12 POD (65) View species results
Terpenoid pathway 167 20 BAHD (53) View species results
Flavonoid pathway 121 8 UFGT (46) View species results
Rosmarinic acid pathway 98 7 C4H (36) View species results
Steroid pathway 43 12 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1083 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 153 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
Mesp21840011610 Terpenoid TPS medium pass TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Mesp22610012670 Terpenoid TPS low borderline TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Mesp5991350132950 Terpenoid TPS medium pass TPS__00113__sp_G1DGI7_TPS7_SELML
Mesp5991350132960 Terpenoid TPS medium pass TPS__00094__sp_F2XF92_ISOPS_PICSI
Mesp6039290143860 Terpenoid TPS medium pass TPS__00162__sp_Q675L4_TPSD1_PICAB
Mesp6039290143870 Terpenoid TPS low borderline TPS__00163__sp_Q675L5_TPSD2_PICAB
Mesp6078780157020 Terpenoid TPS low borderline TPS__00013__sp_A0A1L5YKS7_MTSL4_MARPO
Mesp6120370175000 Terpenoid TPS low borderline TPS__00144__sp_M4HY08_MPIM1_PINBN
Mesp6151980188080 Terpenoid TPS low borderline TPS__00133__sp_J9R1J8_MTS1_SELML
Mesp6165320193920 Terpenoid TPS medium pass TPS__00131__sp_J9QS23_TPS9_SELML
Mesp6219560221860 Terpenoid TPS low borderline TPS__00034__sp_A0A2K9RFZ7_TPS1_VITAC
Mesp6223360223870 Terpenoid TPS low borderline TPS__00081__sp_D8S255_MTS30_SELML
Mesp6285780266210 Terpenoid TPS medium pass TPS__00109__sp_F2XFB2_LEVOS_PICSI
Mesp6947200305450 Terpenoid TPS low borderline TPS__00109__sp_F2XFB2_LEVOS_PICSI
Mesp6947210305510 Terpenoid TPS low borderline TPS__00109__sp_F2XFB2_LEVOS_PICSI