Mesoptychia sp (mesoptychia_sp)
Imported from atlas release summary for Mesoptychia sp.
849
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
849
Candidate Genes
C4H
6.66%
4CL
6.4%
C3'H/CYP98A
6.07%
CYP76
4.41%
IFS
3.9%
BAHD
3.71%
GS
3.57%
TRI/TRII
2.83%
Other Families
62.45%
More Families (97)
DWF4/CYP90B1
75
2.76%
F3H
74
2.72%
T3O
73
2.68%
POD
72
2.65%
STR
70
2.57%
BR6OX2/CYP85A2
69
2.54%
IFR
65
2.39%
NMT
58
2.13%
UFGT
56
2.06%
UGT
52
1.91%
7DLGT
50
1.84%
CAD
50
1.84%
H6H
49
1.8%
F3'H/CYP75B
49
1.8%
G8O/G8H
36
1.32%
T16H
32
1.18%
COMT
31
1.14%
PAL
30
1.1%
IO
27
0.99%
FNS
27
0.99%
HCT
27
0.99%
SMT1/SMT2/SMT3
27
0.99%
BR6OX1/CYP85A1
26
0.96%
PYKS
25
0.92%
RAS
25
0.92%
CODM/T6ODM
23
0.85%
LAMT
20
0.74%
CYP719
19
0.7%
ANR
19
0.7%
CHS
19
0.7%
F3'5'H/CYP75A
19
0.7%
NCS
18
0.66%
SLS
16
0.59%
CPR
15
0.55%
CAS
15
0.55%
CPD/CYP90A1
15
0.55%
TPS
15
0.55%
SGD
14
0.51%
CNMT
14
0.51%
COR
14
0.51%
CSE
14
0.51%
CCR
12
0.44%
LAC
12
0.44%
CYP71
12
0.44%
BBE
11
0.4%
F5H/CYP84A
11
0.4%
16OMT
10
0.37%
DFR
10
0.37%
ANS/LDOX
10
0.37%
CYP80B1
8
0.29%
TAT
8
0.29%
GGPPS
8
0.29%
7DLH
7
0.26%
ISY
7
0.26%
PMT
6
0.22%
CYP90D1
6
0.22%
FPPS
6
0.22%
XMT_MXMT_DXMT
5
0.18%
8HGO
5
0.18%
CYP80F1
5
0.18%
GES
5
0.18%
HPPR
5
0.18%
ROT3/CYP90C1
5
0.18%
MVK
5
0.18%
AACT
5
0.18%
MPO
4
0.15%
ADC
4
0.15%
TDC
4
0.15%
CCoAOMT
4
0.15%
IDI
4
0.15%
6OMT_4OMT_SOMT
3
0.11%
CHI
3
0.11%
DWF1
3
0.11%
SQS/FDFT1
3
0.11%
DET2
3
0.11%
GPPS
3
0.11%
DXS
3
0.11%
MCT/IspD
3
0.11%
CMK/IspE
3
0.11%
ODC
2
0.07%
FLS
2
0.07%
FK
2
0.07%
SMO1/SMO2
2
0.07%
MVD
2
0.07%
TYDC_DDC
1
0.04%
DWF5
1
0.04%
CYP51G1
1
0.04%
DWF7
1
0.04%
HYD1
1
0.04%
SQE
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
PMK
1
0.04%
HMGR
1
0.04%
DXR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 233 | 19 | TRI/TRII (40) | View species results |
| Phenylpropanoid pathway | 187 | 12 | POD (65) | View species results |
| Terpenoid pathway | 167 | 20 | BAHD (53) | View species results |
| Flavonoid pathway | 121 | 8 | UFGT (46) | View species results |
| Rosmarinic acid pathway | 98 | 7 | C4H (36) | View species results |
| Steroid pathway | 43 | 12 | SMT1/SMT2/SMT3 (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1083 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 153 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mesp24190014030 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Mesp24350014250 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp26270016230 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp35140023980 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Mesp353430024050 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Mesp3772380027390 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Mesp3894970033310 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp3896450033540 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp3900330033960 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp3928750036580 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp42800043130 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp4325060045190 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp4355640046240 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp44920051970 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp4574290053600 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp4728470058750 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp47300058920 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp4854690064350 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp4859650064550 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| Mesp4865400064910 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp4865400064920 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp5161180068890 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp5215830070380 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp5219870070760 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp5288650075430 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp5354300076210 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Mesp5355420076280 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp5467800085040 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp5563940086980 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Mesp5616110092660 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp5653960095400 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp5656020095640 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Mesp5724690100950 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp5819920109070 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp5823540109830 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp5891900116640 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp5901670118300 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| Mesp5983320130880 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Mesp5991650133020 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp6002830135340 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Mesp6009160136630 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp6029330141510 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mesp603560143190 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mesp6046750145890 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp6074140155080 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp6074460155230 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| Mesp6083090158890 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp6115880172580 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mesp6135860182160 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mesp6148610186600 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |