PlantSME Plant secondary metabolism enzyme database

Mesoptychia sp (mesoptychia_sp)

Imported from atlas release summary for Mesoptychia sp.

1340
Candidate Protein Records
849
Pathway-Level Records
2719
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Alkaloid pathway 27.44% Phenylpropanoid pathway 22.03% Terpenoid pathway 19.67% Flavonoid pathway 14.25% Rosmarinic acid pathway 11.54% Steroid pathway 5.06%
Family Distribution
C4H 6.66% 4CL 6.4% C3'H/CYP98A 6.07% CYP76 4.41% IFS 3.9% BAHD 3.71% GS 3.57% TRI/TRII 2.83%
Other Families 62.45%
More Families (97)
DWF4/CYP90B1 75 2.76% F3H 74 2.72% T3O 73 2.68% POD 72 2.65% STR 70 2.57% BR6OX2/CYP85A2 69 2.54% IFR 65 2.39% NMT 58 2.13% UFGT 56 2.06% UGT 52 1.91% 7DLGT 50 1.84% CAD 50 1.84% H6H 49 1.8% F3'H/CYP75B 49 1.8% G8O/G8H 36 1.32% T16H 32 1.18% COMT 31 1.14% PAL 30 1.1% IO 27 0.99% FNS 27 0.99% HCT 27 0.99% SMT1/SMT2/SMT3 27 0.99% BR6OX1/CYP85A1 26 0.96% PYKS 25 0.92% RAS 25 0.92% CODM/T6ODM 23 0.85% LAMT 20 0.74% CYP719 19 0.7% ANR 19 0.7% CHS 19 0.7% F3'5'H/CYP75A 19 0.7% NCS 18 0.66% SLS 16 0.59% CPR 15 0.55% CAS 15 0.55% CPD/CYP90A1 15 0.55% TPS 15 0.55% SGD 14 0.51% CNMT 14 0.51% COR 14 0.51% CSE 14 0.51% CCR 12 0.44% LAC 12 0.44% CYP71 12 0.44% BBE 11 0.4% F5H/CYP84A 11 0.4% 16OMT 10 0.37% DFR 10 0.37% ANS/LDOX 10 0.37% CYP80B1 8 0.29% TAT 8 0.29% GGPPS 8 0.29% 7DLH 7 0.26% ISY 7 0.26% PMT 6 0.22% CYP90D1 6 0.22% FPPS 6 0.22% XMT_MXMT_DXMT 5 0.18% 8HGO 5 0.18% CYP80F1 5 0.18% GES 5 0.18% HPPR 5 0.18% ROT3/CYP90C1 5 0.18% MVK 5 0.18% AACT 5 0.18% MPO 4 0.15% ADC 4 0.15% TDC 4 0.15% CCoAOMT 4 0.15% IDI 4 0.15% 6OMT_4OMT_SOMT 3 0.11% CHI 3 0.11% DWF1 3 0.11% SQS/FDFT1 3 0.11% DET2 3 0.11% GPPS 3 0.11% DXS 3 0.11% MCT/IspD 3 0.11% CMK/IspE 3 0.11% ODC 2 0.07% FLS 2 0.07% FK 2 0.07% SMO1/SMO2 2 0.07% MVD 2 0.07% TYDC_DDC 1 0.04% DWF5 1 0.04% CYP51G1 1 0.04% DWF7 1 0.04% HYD1 1 0.04% SQE 1 0.04% HDS/IspG 1 0.04% HDR/IspH 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04% PMK 1 0.04% HMGR 1 0.04% DXR 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Alkaloid pathway 233 19 TRI/TRII (40) View species results
Phenylpropanoid pathway 187 12 POD (65) View species results
Terpenoid pathway 167 20 BAHD (53) View species results
Flavonoid pathway 121 8 UFGT (46) View species results
Rosmarinic acid pathway 98 7 C4H (36) View species results
Steroid pathway 43 12 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1083 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 153 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Mesp6289930269350 Alkaloid TRI/TRII medium pass
Mesp6294110271970 Alkaloid TRI/TRII low borderline
Mesp6298200274830 Alkaloid TRI/TRII medium pass
Mesp6301810275300 Alkaloid TRI/TRII low borderline
Mesp6315280275760 Alkaloid TRI/TRII low borderline
Mesp6523460284070 Alkaloid TRI/TRII low borderline
Mesp6523470284080 Alkaloid TRI/TRII low borderline
Mesp6543610284710 Alkaloid TRI/TRII low borderline
Mesp6543620284720 Alkaloid TRI/TRII low borderline
Mesp6787860290150 Alkaloid TRI/TRII low borderline
Mesp6849460293850 Alkaloid TRI/TRII medium pass
Mesp6849470293900 Alkaloid TRI/TRII medium pass
Mesp8780307940 Alkaloid TRI/TRII low borderline
Mesp6207000214300 Alkaloid TYDC_DDC medium borderline
Mesp19390009380 Alkaloid XMT_MXMT_DXMT low borderline
Mesp4802970062540 Alkaloid XMT_MXMT_DXMT low borderline
Mesp6057700149370 Alkaloid XMT_MXMT_DXMT low borderline
Mesp6071500153890 Alkaloid XMT_MXMT_DXMT low borderline
Mesp6224080224320 Alkaloid XMT_MXMT_DXMT low borderline