Mesoptychia sp (mesoptychia_sp)
Imported from atlas release summary for Mesoptychia sp.
849
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
849
Candidate Genes
C4H
6.66%
4CL
6.4%
C3'H/CYP98A
6.07%
CYP76
4.41%
IFS
3.9%
BAHD
3.71%
GS
3.57%
TRI/TRII
2.83%
Other Families
62.45%
More Families (97)
DWF4/CYP90B1
75
2.76%
F3H
74
2.72%
T3O
73
2.68%
POD
72
2.65%
STR
70
2.57%
BR6OX2/CYP85A2
69
2.54%
IFR
65
2.39%
NMT
58
2.13%
UFGT
56
2.06%
UGT
52
1.91%
7DLGT
50
1.84%
CAD
50
1.84%
H6H
49
1.8%
F3'H/CYP75B
49
1.8%
G8O/G8H
36
1.32%
T16H
32
1.18%
COMT
31
1.14%
PAL
30
1.1%
IO
27
0.99%
FNS
27
0.99%
HCT
27
0.99%
SMT1/SMT2/SMT3
27
0.99%
BR6OX1/CYP85A1
26
0.96%
PYKS
25
0.92%
RAS
25
0.92%
CODM/T6ODM
23
0.85%
LAMT
20
0.74%
CYP719
19
0.7%
ANR
19
0.7%
CHS
19
0.7%
F3'5'H/CYP75A
19
0.7%
NCS
18
0.66%
SLS
16
0.59%
CPR
15
0.55%
CAS
15
0.55%
CPD/CYP90A1
15
0.55%
TPS
15
0.55%
SGD
14
0.51%
CNMT
14
0.51%
COR
14
0.51%
CSE
14
0.51%
CCR
12
0.44%
LAC
12
0.44%
CYP71
12
0.44%
BBE
11
0.4%
F5H/CYP84A
11
0.4%
16OMT
10
0.37%
DFR
10
0.37%
ANS/LDOX
10
0.37%
CYP80B1
8
0.29%
TAT
8
0.29%
GGPPS
8
0.29%
7DLH
7
0.26%
ISY
7
0.26%
PMT
6
0.22%
CYP90D1
6
0.22%
FPPS
6
0.22%
XMT_MXMT_DXMT
5
0.18%
8HGO
5
0.18%
CYP80F1
5
0.18%
GES
5
0.18%
HPPR
5
0.18%
ROT3/CYP90C1
5
0.18%
MVK
5
0.18%
AACT
5
0.18%
MPO
4
0.15%
ADC
4
0.15%
TDC
4
0.15%
CCoAOMT
4
0.15%
IDI
4
0.15%
6OMT_4OMT_SOMT
3
0.11%
CHI
3
0.11%
DWF1
3
0.11%
SQS/FDFT1
3
0.11%
DET2
3
0.11%
GPPS
3
0.11%
DXS
3
0.11%
MCT/IspD
3
0.11%
CMK/IspE
3
0.11%
ODC
2
0.07%
FLS
2
0.07%
FK
2
0.07%
SMO1/SMO2
2
0.07%
MVD
2
0.07%
TYDC_DDC
1
0.04%
DWF5
1
0.04%
CYP51G1
1
0.04%
DWF7
1
0.04%
HYD1
1
0.04%
SQE
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
PMK
1
0.04%
HMGR
1
0.04%
DXR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 233 | 19 | TRI/TRII (40) | View species results |
| Phenylpropanoid pathway | 187 | 12 | POD (65) | View species results |
| Terpenoid pathway | 167 | 20 | BAHD (53) | View species results |
| Flavonoid pathway | 121 | 8 | UFGT (46) | View species results |
| Rosmarinic acid pathway | 98 | 7 | C4H (36) | View species results |
| Steroid pathway | 43 | 12 | SMT1/SMT2/SMT3 (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1083 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 153 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Mesp6326890276450 | Alkaloid | CNMT | low | borderline |
| Mesp6326900276480 | Alkaloid | CNMT | low | borderline |
| Mesp6407430279380 | Alkaloid | CNMT | low | borderline |
| Mesp6670287920 | Alkaloid | CNMT | low | borderline |
| Mesp13060002880 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp18790009110 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp20920010690 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp4055890038690 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp44010049420 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp5759020102990 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp5999270134510 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6014410137370 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6025060140320 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6105000167960 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6138480182890 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6145540185400 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6181880201290 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6190150206180 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6209340216090 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6225360225350 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6294150271980 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6294150271990 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6294150272000 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6880240296760 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6880260296810 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6908050299970 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp6908060300040 | Alkaloid | CODM/T6ODM | medium | borderline |
| Mesp4324050045070 | Alkaloid | COR | medium | pass |
| Mesp4796850062200 | Alkaloid | COR | medium | pass |
| Mesp5152100068240 | Alkaloid | COR | low | borderline |
| Mesp5170590069270 | Alkaloid | COR | medium | pass |
| Mesp5864520113350 | Alkaloid | COR | medium | pass |
| Mesp6078090156550 | Alkaloid | COR | low | borderline |
| Mesp6104500167770 | Alkaloid | COR | medium | pass |
| Mesp6172930197870 | Alkaloid | COR | medium | pass |
| Mesp6197610210040 | Alkaloid | COR | medium | pass |
| Mesp6248720240060 | Alkaloid | COR | medium | pass |
| Mesp6248830240160 | Alkaloid | COR | medium | pass |
| Mesp6270510255370 | Alkaloid | COR | medium | pass |
| Mesp6291280270260 | Alkaloid | COR | medium | pass |
| Mesp6291280270280 | Alkaloid | COR | medium | pass |
| Mesp13060002870 | Alkaloid | CYP719 | medium | borderline |
| Mesp3927930036480 | Alkaloid | CYP719 | medium | borderline |
| Mesp42390041780 | Alkaloid | CYP719 | medium | borderline |
| Mesp4579600054780 | Alkaloid | CYP719 | medium | borderline |
| Mesp47460059740 | Alkaloid | CYP719 | medium | borderline |
| Mesp5227340071830 | Alkaloid | CYP719 | low | borderline |
| Mesp5285870075110 | Alkaloid | CYP719 | medium | borderline |
| Mesp5380970078530 | Alkaloid | CYP719 | medium | borderline |
| Mesp5819150108880 | Alkaloid | CYP719 | medium | borderline |