Metzgeria hamata (metzgeria_hamata)
Imported from atlas release summary for Metzgeria hamata.
850
Candidate Protein Records
585
Pathway-Level Records
1595
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1595
Family-Level Calls
C4H
7.52%
BAHD
6.71%
POD
6.33%
C3'H/CYP98A
5.14%
CYP76
5.02%
IFS
3.95%
4CL
3.57%
NMT
2.76%
Other Families
59.0%
More Families (96)
UGT
41
2.57%
F3H
40
2.51%
T3O
39
2.45%
UFGT
37
2.32%
7DLGT
36
2.26%
DWF4/CYP90B1
35
2.19%
TRI/TRII
34
2.13%
BR6OX2/CYP85A2
34
2.13%
STR
33
2.07%
IFR
32
2.01%
GS
27
1.69%
H6H
27
1.69%
RAS
26
1.63%
SMT1/SMT2/SMT3
24
1.5%
T16H
22
1.38%
HCT
19
1.19%
CAD
19
1.19%
COMT
17
1.07%
PYKS
15
0.94%
CODM/T6ODM
15
0.94%
CSE
15
0.94%
CNMT
14
0.88%
F3'5'H/CYP75A
14
0.88%
CYP71
14
0.88%
IO
13
0.82%
PMT
12
0.75%
G8O/G8H
12
0.75%
PAL
12
0.75%
SGD
11
0.69%
F3'H/CYP75B
11
0.69%
SLS
10
0.63%
CHS
9
0.56%
ANR
9
0.56%
CAS
9
0.56%
ISY
8
0.5%
CPD/CYP90A1
8
0.5%
COR
7
0.44%
16OMT
6
0.38%
DFR
6
0.38%
HPPR
6
0.38%
SQS/FDFT1
6
0.38%
ROT3/CYP90C1
6
0.38%
CYP90D1
6
0.38%
AACT
6
0.38%
GGPPS
6
0.38%
NCS
5
0.31%
ANS/LDOX
5
0.31%
LAC
5
0.31%
BR6OX1/CYP85A1
5
0.31%
FPPS
5
0.31%
8HGO
4
0.25%
CYP80B1
4
0.25%
TDC
4
0.25%
BBE
4
0.25%
CYP719
4
0.25%
FNS
4
0.25%
F5H/CYP84A
4
0.25%
CCoAOMT
4
0.25%
CCR
4
0.25%
7DLH
3
0.19%
ADC
3
0.19%
CPR
3
0.19%
TAT
3
0.19%
CYP51G1
3
0.19%
SMO1/SMO2
3
0.19%
SQE
3
0.19%
DET2
3
0.19%
HMGR
3
0.19%
MVK
3
0.19%
MCT/IspD
3
0.19%
GPPS
3
0.19%
GES
2
0.13%
LAMT
2
0.13%
TYDC_DDC
2
0.13%
XMT_MXMT_DXMT
2
0.13%
MPO
2
0.13%
DWF1
2
0.13%
HMGS
2
0.13%
DXS
2
0.13%
MVD
2
0.13%
TPS
2
0.13%
IDI
2
0.13%
6OMT_4OMT_SOMT
1
0.06%
CHI
1
0.06%
FLS
1
0.06%
DWF5
1
0.06%
HYD1
1
0.06%
CPI1
1
0.06%
DWF7
1
0.06%
FK
1
0.06%
HDS/IspG
1
0.06%
HDR/IspH
1
0.06%
MDS/IspF
1
0.06%
CMK/IspE
1
0.06%
DXR
1
0.06%
PMK
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 161 | 11 | POD (96) | View species results |
| Terpenoid pathway | 144 | 21 | BAHD (59) | View species results |
| Alkaloid pathway | 126 | 18 | TRI/TRII (26) | View species results |
| Flavonoid pathway | 65 | 9 | UFGT (28) | View species results |
| Rosmarinic acid pathway | 55 | 7 | C4H (31) | View species results |
| Steroid pathway | 34 | 11 | SMT1/SMT2/SMT3 (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 592 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 152 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Mhamcontig_140063140 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_140063330 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1420065670 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1420066290 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_1420066300 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_1500073300 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_1500073320 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1500073940 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1610088950 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_1660100100 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1910133360 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1930134860 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1940137050 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_2000142690 | Alkaloid | TRI/TRII | low | borderline |
| Mhamcontig_240188090 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_390209420 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_410213020 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_410213040 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_540223010 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_60229850 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_610236580 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_710260720 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_90280310 | Alkaloid | TRI/TRII | medium | pass |
| Mhamcontig_1910132510 | Alkaloid | TYDC_DDC | medium | borderline |
| Mhamcontig_1990141450 | Alkaloid | TYDC_DDC | low | borderline |
| Mhamcontig_1980139310 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Mhamcontig_2280170420 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| Mhamcontig_1100011280 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_1160017940 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_1280038520 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_1420065230 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_1660100580 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_1720105000 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_1890129090 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_190130190 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_2040147620 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_2140156030 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_240186820 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_290204330 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_410212650 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_490219520 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_650239380 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_680244730 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_680245060 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_680251860 | Flavonoid | 4CL | low | borderline |
| Mhamcontig_740263800 | Flavonoid | 4CL | medium | pass |
| Mhamcontig_1310054600 | Flavonoid | ANR | medium | borderline |
| Mhamcontig_1940137450 | Flavonoid | ANR | medium | borderline |
| Mhamcontig_2220165710 | Flavonoid | ANR | medium | borderline |
| Mhamcontig_420214680 | Flavonoid | ANR | medium | borderline |