Micromonas sp.RCC299 (micromonas_sp_rcc299)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 38.2% Alkaloid pathway 26.97% Phenylpropanoid pathway 14.61% Steroid pathway 14.61% Rosmarinic acid pathway 3.37% Flavonoid pathway 2.25%

Family Distribution

89 Candidate Genes

NMT 8.0% BAHD 6.15% 4CL 5.54% IFR 5.23% CYP71 5.23% C4H 3.38% POD 3.38% C3'H/CYP98A 3.38%

Other Families 59.69%

More Families (71)

TRI/TRII 10 3.08% IFS 10 3.08% H6H 8 2.46% STR 8 2.46% CNMT 8 2.46% SMT1/SMT2/SMT3 7 2.15% F3H 6 1.85% ANR 6 1.85% CSE 6 1.85% CYP76 6 1.85% PMT 5 1.54% T3O 5 1.54% COR 5 1.54% CAS 5 1.54% DWF4/CYP90B1 5 1.54% GS 4 1.23% SQS/FDFT1 4 1.23% G8O/G8H 3 0.92% CYP80B1 3 0.92% SLS 3 0.92% DFR 3 0.92% CCR 3 0.92% RAS 3 0.92% CPR 3 0.92% CYP90D1 3 0.92% CPD/CYP90A1 3 0.92% FPPS 3 0.92% GGPPS 3 0.92% AACT 3 0.92% MVK 3 0.92% PYKS 2 0.62% GES 2 0.62% UFGT 2 0.62% FNS 2 0.62% DET2 2 0.62% MCT/IspD 2 0.62% MPO 1 0.31% 8HGO 1 0.31% ODC 1 0.31% TDC 1 0.31% T16H 1 0.31% NCS 1 0.31% 7DLH 1 0.31% F3'5'H/CYP75A 1 0.31% CHS 1 0.31% ANS/LDOX 1 0.31% FLS 1 0.31% F3'H/CYP75B 1 0.31% COMT 1 0.31% F5H/CYP84A 1 0.31% CAD 1 0.31% CCoAOMT 1 0.31% TAT 1 0.31% HPPR 1 0.31% FK 1 0.31% DWF5 1 0.31% BR6OX2/CYP85A2 1 0.31% SQE 1 0.31% CYP51G1 1 0.31% CPI1 1 0.31% BR6OX1/CYP85A1 1 0.31% SMO1/SMO2 1 0.31% DXS 1 0.31% MVD 1 0.31% DXR 1 0.31% CMK/IspE 1 0.31% MDS/IspF 1 0.31% IDI 1 0.31% UGT 1 0.31% HDS/IspG 1 0.31% HDR/IspH 1 0.31%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	34	12	BAHD (13)	View species results
Alkaloid pathway	24	8	NMT (7)	View species results
Phenylpropanoid pathway	13	4	POD (10)	View species results
Steroid pathway	13	8	CAS (4)	View species results
Rosmarinic acid pathway	3	2	CPR (2)	View species results
Flavonoid pathway	2	1	IFR (2)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	20	88	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, SLS, T16H, T3O
BAHD/acyltransferase	2	23	BAHD, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Gene	Pathway	Family	Confidence	Status
107347\|PACid:27398832	Flavonoid	4CL	low	borderline
108368\|PACid:27402436	Flavonoid	4CL	low	borderline
55049\|PACid:27398894	Flavonoid	4CL	low	borderline
93685\|PACid:27398380	Flavonoid	4CL	low	borderline
97670\|PACid:27404495	Flavonoid	4CL	low	borderline
62297\|PACid:27405018	Flavonoid	ANR	low	borderline
68702\|PACid:27403909	Flavonoid	ANR	low	borderline
75952\|PACid:27395839	Flavonoid	ANR	low	borderline
79048\|PACid:27396048	Flavonoid	ANR	low	borderline
81085\|PACid:27400249	Flavonoid	ANR	low	borderline
84789\|PACid:27401249	Flavonoid	ANR	low	borderline
61394\|PACid:27401418	Flavonoid	ANS/LDOX	medium	borderline
62058\|PACid:27397668	Flavonoid	C4H	low	borderline
58862\|PACid:27395463	Flavonoid	CHS	low	borderline
100547\|PACid:27395403	Flavonoid	DFR	medium	borderline
80077\|PACid:27398556	Flavonoid	DFR	low	borderline
82103\|PACid:27395631	Flavonoid	DFR	low	borderline
57505\|PACid:27400663	Flavonoid	F3'5'H/CYP75A	medium	borderline
82397\|PACid:27402073	Flavonoid	F3'H/CYP75B	medium	borderline
101662\|PACid:27404335	Flavonoid	F3H	low	borderline
56736\|PACid:27398126	Flavonoid	F3H	low	borderline
56773\|PACid:27398455	Flavonoid	F3H	low	borderline
59138\|PACid:27402475	Flavonoid	F3H	low	borderline
59237\|PACid:27402320	Flavonoid	F3H	low	borderline
64932\|PACid:27397058	Flavonoid	F3H	low	borderline
78816\|PACid:27396447	Flavonoid	FLS	low	borderline
59811\|PACid:27404123	Flavonoid	FNS	low	borderline
63226\|PACid:27399794	Flavonoid	FNS	medium	borderline
101217\|PACid:27402203	Flavonoid	IFR	low	borderline
50720\|PACid:27400890	Flavonoid	IFR	low	borderline
50930\|PACid:27404142	Flavonoid	IFR	low	borderline
54857\|PACid:27398978	Flavonoid	IFR	low	borderline
57570\|PACid:27400200	Flavonoid	IFR	low	borderline
61040\|PACid:27401306	Flavonoid	IFR	low	borderline
61973\|PACid:27397644	Flavonoid	IFR	low	borderline
62770\|PACid:27404785	Flavonoid	IFR	medium	pass
72027\|PACid:27399591	Flavonoid	IFR	low	borderline
79652\|PACid:27398019	Flavonoid	IFR	low	borderline
82786\|PACid:27401962	Flavonoid	IFR	low	borderline
84210\|PACid:27403118	Flavonoid	IFR	low	borderline
85562\|PACid:27397399	Flavonoid	IFR	low	borderline
85739\|PACid:27397814	Flavonoid	IFR	low	borderline
93395\|PACid:27396330	Flavonoid	IFR	low	borderline
93721\|PACid:27397882	Flavonoid	IFR	low	borderline
97210\|PACid:27398117	Flavonoid	IFR	medium	pass
55968\|PACid:27396953	Flavonoid	IFS	low	borderline
57317\|PACid:27398378	Flavonoid	IFS	medium	borderline
59502\|PACid:27402096	Flavonoid	IFS	low	borderline
60720\|PACid:27403589	Flavonoid	IFS	low	borderline
60838\|PACid:27403159	Flavonoid	IFS	low	borderline