Mimulus luteus (mimulus_luteus)
Imported from atlas release summary for Mimulus luteus.
1980
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1980
Candidate Genes
C4H
6.71%
BAHD
6.25%
C3'H/CYP98A
5.21%
POD
4.48%
4CL
4.16%
UGT
4.03%
7DLGT
3.8%
UFGT
3.74%
Other Families
61.62%
More Families (96)
CYP76
172
3.27%
IFS
157
2.98%
NMT
141
2.68%
F3H
136
2.58%
T3O
135
2.57%
F3'H/CYP75B
125
2.38%
BR6OX2/CYP85A2
97
1.84%
CODM/T6ODM
95
1.81%
STR
95
1.81%
DWF4/CYP90B1
82
1.56%
CAD
76
1.44%
TPS
74
1.41%
H6H
70
1.33%
G8O/G8H
70
1.33%
CAS
68
1.29%
GES
67
1.27%
LAC
67
1.27%
SMT1/SMT2/SMT3
62
1.18%
7DLH
58
1.1%
CYP71
50
0.95%
IFR
49
0.93%
CSE
48
0.91%
RAS
48
0.91%
CPD/CYP90A1
48
0.91%
TRI/TRII
45
0.86%
BBE
45
0.86%
PYKS
43
0.82%
HCT
43
0.82%
CYP90D1
42
0.8%
F5H/CYP84A
40
0.76%
TAT
40
0.76%
GS
39
0.74%
PMT
38
0.72%
T16H
35
0.67%
F3'5'H/CYP75A
35
0.67%
SLS
34
0.65%
SGD
34
0.65%
FNS
33
0.63%
COMT
31
0.59%
IO
29
0.55%
HMGR
29
0.55%
ANR
28
0.53%
CCR
26
0.49%
NCS
24
0.46%
ANS/LDOX
21
0.4%
DFR
21
0.4%
8HGO
19
0.36%
LAMT
18
0.34%
CPR
16
0.3%
FPPS
16
0.3%
PAL
15
0.29%
CCoAOMT
15
0.29%
BR6OX1/CYP85A1
15
0.29%
GGPPS
15
0.29%
COR
13
0.25%
CHS
12
0.23%
ROT3/CYP90C1
12
0.23%
16OMT
11
0.21%
CYP80B1
11
0.21%
MPO
11
0.21%
CYP80F1
10
0.19%
SQS/FDFT1
10
0.19%
MVK
10
0.19%
DXS
10
0.19%
AACT
10
0.19%
DET2
9
0.17%
CNMT
8
0.15%
CYP719
8
0.15%
HPPR
8
0.15%
CYP51G1
8
0.15%
MVD
8
0.15%
6OMT_4OMT_SOMT
7
0.13%
ISY
7
0.13%
TYDC_DDC
7
0.13%
CHI
6
0.11%
SQE
6
0.11%
SMO1/SMO2
6
0.11%
TDC
5
0.1%
ADC
5
0.1%
PMK
5
0.1%
CMK/IspE
5
0.1%
FLS
4
0.08%
MDS/IspF
4
0.08%
IDI
4
0.08%
FK
3
0.06%
HYD1
3
0.06%
DWF7
3
0.06%
MCT/IspD
3
0.06%
DXR
3
0.06%
XMT_MXMT_DXMT
2
0.04%
CPI1
2
0.04%
DWF1
2
0.04%
DWF5
2
0.04%
HMGS
2
0.04%
HDR/IspH
2
0.04%
HDS/IspG
2
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 606 | 20 | BAHD (212) | View species results |
| Phenylpropanoid pathway | 425 | 13 | POD (194) | View species results |
| Alkaloid pathway | 410 | 24 | 7DLGT (67) | View species results |
| Flavonoid pathway | 291 | 14 | UFGT (185) | View species results |
| Rosmarinic acid pathway | 141 | 7 | 4CL (52) | View species results |
| Steroid pathway | 107 | 13 | CAS (46) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1900 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 420 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Mlutescaffold_1060016290.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_12690053730.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_1270054100.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_1270054110.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_1320063510.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_1330064750.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_14380081600.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_14700085100.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_15630099340.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_16300109440.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_1680115140.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_17040118490.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_18210130720.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_2440178640.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_2650194240.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_2760199240.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_2760199250.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_32620228940.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_34460239000.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_400266270.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_43050283280.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_4690299730.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_4760303170.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_5020313840.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_5090316120.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_5950350070.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_640368770.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_640369120.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_640369130.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_6740380120.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_800416470.1 | Alkaloid | SGD | low | borderline |
| Mlutescaffold_8080418880.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_810420430.1 | Alkaloid | SGD | medium | pass |
| Mlutescaffold_8260424280.1 | Alkaloid | SGD | medium | pass |