PlantSME Plant secondary metabolism enzyme database

Miscanthus sinensis (miscanthus_sinensis)

Imported from atlas release summary for Miscanthus sinensis.

4537
Candidate Protein Records
3871
Pathway-Level Records
9340
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1110 21 BAHD (401) View species results
Alkaloid pathway 914 23 7DLGT (174) View species results
Phenylpropanoid pathway 782 12 POD (366) View species results
Flavonoid pathway 522 12 UFGT (337) View species results
Rosmarinic acid pathway 319 7 C4H (128) View species results
Steroid pathway 224 13 CAS (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3406 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 702 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Msin19G0006610.1 Alkaloid NMT low borderline
Msin19G0008740.1 Alkaloid NMT medium borderline
Msin19G0027900.1 Alkaloid NMT low borderline
Msin19G0027900.2 Alkaloid NMT low borderline
Msinscaffold001680011860.1 Alkaloid NMT medium pass
Msinscaffold002500015450.1 Alkaloid NMT medium pass
Msinscaffold002680016200.1 Alkaloid NMT medium pass
Msinscaffold007500030870.1 Alkaloid NMT medium pass
Msinscaffold008410032620.1 Alkaloid NMT medium pass
Msinscaffold008410032620.2 Alkaloid NMT medium pass
Msinscaffold009900035550.1 Alkaloid NMT low borderline
Msinscaffold010340036500.1 Alkaloid NMT medium pass
Msinscaffold010340036500.2 Alkaloid NMT medium pass
Msinscaffold010340036500.3 Alkaloid NMT medium pass
Msinscaffold010340036500.4 Alkaloid NMT medium pass
Msinscaffold016580045670.1 Alkaloid NMT medium borderline
Msinscaffold016580045670.2 Alkaloid NMT medium borderline
Msinscaffold016580045670.3 Alkaloid NMT medium pass
Msinscaffold017340046530.1 Alkaloid NMT medium pass
Msinscaffold017880047350.1 Alkaloid NMT low borderline
Msinscaffold024080053240.1 Alkaloid NMT medium borderline
Msin03G0023010.1 Alkaloid ODC medium pass
Msin03G0023100.1 Alkaloid ODC medium pass
Msin04G0026530.1 Alkaloid ODC medium pass
Msin04G0026540.1 Alkaloid ODC medium pass
Msin04G0026670.1 Alkaloid ODC medium pass
Msin04G0028490.1 Alkaloid ODC medium pass
Msin09G0015560.1 Alkaloid ODC medium pass
Msin10G0013340.1 Alkaloid ODC medium pass
Msinscaffold008140032150.1 Alkaloid ODC medium pass
Msin01G0018460.1 Alkaloid PMT medium pass
Msin01G0025550.1 Alkaloid PMT medium pass
Msin01G0025950.1 Alkaloid PMT low borderline
Msin01G0032000.1 Alkaloid PMT low borderline
Msin01G0032020.1 Alkaloid PMT low borderline
Msin02G0017180.1 Alkaloid PMT medium pass
Msin02G0025170.1 Alkaloid PMT medium pass
Msin03G0009860.1 Alkaloid PMT medium borderline
Msin03G0014700.1 Alkaloid PMT low borderline
Msin03G0017490.1 Alkaloid PMT medium pass
Msin03G0018310.1 Alkaloid PMT medium pass
Msin04G0009510.1 Alkaloid PMT medium pass
Msin04G0011010.1 Alkaloid PMT medium borderline
Msin04G0018600.1 Alkaloid PMT medium pass
Msin05G0003980.1 Alkaloid PMT medium pass
Msin05G0007370.1 Alkaloid PMT medium pass
Msin05G0007900.1 Alkaloid PMT low borderline
Msin05G0007900.2 Alkaloid PMT low borderline
Msin05G0007900.3 Alkaloid PMT low borderline
Msin05G0040860.1 Alkaloid PMT medium pass