Musa schizocarpa (musa_schizocarpa)
Imported from atlas release summary for Musa schizocarpa.
1298
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1298
Candidate Genes
BAHD
6.61%
C3'H/CYP98A
5.92%
C4H
5.82%
POD
5.1%
4CL
4.42%
IFS
3.93%
CYP76
3.24%
UGT
3.14%
Other Families
61.83%
More Families (94)
T3O
89
2.91%
UFGT
88
2.88%
7DLGT
87
2.85%
DWF4/CYP90B1
74
2.42%
F3H
73
2.39%
NMT
67
2.19%
F3'H/CYP75B
61
2.0%
STR
59
1.93%
BR6OX2/CYP85A2
59
1.93%
RAS
48
1.57%
SMT1/SMT2/SMT3
46
1.5%
CODM/T6ODM
43
1.41%
PYKS
42
1.37%
CSE
41
1.34%
CYP71
41
1.34%
COMT
40
1.31%
HCT
39
1.28%
T16H
37
1.21%
LAC
37
1.21%
PMT
36
1.18%
TRI/TRII
33
1.08%
IFR
31
1.01%
CAD
30
0.98%
H6H
29
0.95%
SGD
27
0.88%
CYP90D1
27
0.88%
16OMT
25
0.82%
SLS
24
0.79%
GS
24
0.79%
PAL
24
0.79%
CAS
23
0.75%
CCR
22
0.72%
G8O/G8H
21
0.69%
GES
19
0.62%
TPS
19
0.62%
ANR
18
0.59%
F5H/CYP84A
17
0.56%
LAMT
15
0.49%
IO
15
0.49%
CHS
15
0.49%
FNS
15
0.49%
CPD/CYP90A1
14
0.46%
BR6OX1/CYP85A1
14
0.46%
COR
13
0.43%
DFR
13
0.43%
CYP51G1
13
0.43%
7DLH
12
0.39%
8HGO
12
0.39%
NCS
11
0.36%
F3'5'H/CYP75A
11
0.36%
BBE
9
0.29%
CCoAOMT
9
0.29%
CPR
9
0.29%
SMO1/SMO2
9
0.29%
AACT
9
0.29%
GGPPS
9
0.29%
MPO
8
0.26%
CYP719
8
0.26%
SQS/FDFT1
8
0.26%
MVD
8
0.26%
DXS
7
0.23%
CNMT
6
0.2%
ROT3/CYP90C1
6
0.2%
CYP80B1
5
0.16%
HPPR
5
0.16%
SQE
5
0.16%
FPPS
5
0.16%
ADC
4
0.13%
ISY
4
0.13%
TDC
4
0.13%
CHI
4
0.13%
ANS/LDOX
4
0.13%
TAT
4
0.13%
DWF7
4
0.13%
DET2
4
0.13%
MVK
4
0.13%
IDI
4
0.13%
TYDC_DDC
3
0.1%
DWF1
3
0.1%
HMGR
3
0.1%
HMGS
3
0.1%
FLS
2
0.07%
FK
2
0.07%
CPI1
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
MDS/IspF
2
0.07%
MCT/IspD
2
0.07%
6OMT_4OMT_SOMT
1
0.03%
HYD1
1
0.03%
DWF5
1
0.03%
HDS/IspG
1
0.03%
PMK
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 345 | 17 | BAHD (159) | View species results |
| Phenylpropanoid pathway | 331 | 11 | POD (148) | View species results |
| Alkaloid pathway | 295 | 19 | 7DLGT (55) | View species results |
| Flavonoid pathway | 150 | 9 | UFGT (84) | View species results |
| Rosmarinic acid pathway | 102 | 7 | C4H (36) | View species results |
| Steroid pathway | 75 | 11 | SMT1/SMT2/SMT3 (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1126 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 289 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Msch02G0007920.1 | Alkaloid | GS | low | borderline |
| Msch03G0016530.1 | Alkaloid | GS | low | borderline |
| Msch04G0005780.1 | Alkaloid | GS | high | pass |
| Msch04G0007290.1 | Alkaloid | GS | low | borderline |
| Msch04G0012010.1 | Alkaloid | GS | high | pass |
| Msch04G0016390.1 | Alkaloid | GS | low | borderline |
| Msch04G0016530.1 | Alkaloid | GS | high | pass |
| Msch04G0020360.1 | Alkaloid | GS | high | pass |
| Msch04G0025330.1 | Alkaloid | GS | medium | pass |
| Msch04G0031770.1 | Alkaloid | GS | high | pass |
| Msch05G0010640.1 | Alkaloid | GS | high | pass |
| Msch05G0023460.1 | Alkaloid | GS | low | borderline |
| Msch05G0026040.1 | Alkaloid | GS | medium | pass |
| Msch06G0023910.1 | Alkaloid | GS | low | borderline |
| Msch07G0006660.1 | Alkaloid | GS | high | pass |
| Msch08G0014790.1 | Alkaloid | GS | low | borderline |
| Msch08G0026390.1 | Alkaloid | GS | low | borderline |
| Msch09G0016330.1 | Alkaloid | GS | low | borderline |
| Msch09G0019050.1 | Alkaloid | GS | low | borderline |
| Msch09G0026410.1 | Alkaloid | GS | high | pass |
| Msch09G0029650.1 | Alkaloid | GS | high | pass |
| Msch10G0016620.1 | Alkaloid | GS | high | pass |
| Msch11G0007900.1 | Alkaloid | GS | low | borderline |
| MschMschizocarpa_scaffold_180000880.1 | Alkaloid | GS | low | borderline |