PlantSME Plant secondary metabolism enzyme database

Musa schizocarpa (musa_schizocarpa)

Imported from atlas release summary for Musa schizocarpa.

1298
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.58% Phenylpropanoid pathway 25.5% Alkaloid pathway 22.73% Flavonoid pathway 11.56% Rosmarinic acid pathway 7.86% Steroid pathway 5.78%
Family Distribution
BAHD 6.61% C3'H/CYP98A 5.92% C4H 5.82% POD 5.1% 4CL 4.42% IFS 3.93% CYP76 3.24% UGT 3.14%
Other Families 61.83%
More Families (94)
T3O 89 2.91% UFGT 88 2.88% 7DLGT 87 2.85% DWF4/CYP90B1 74 2.42% F3H 73 2.39% NMT 67 2.19% F3'H/CYP75B 61 2.0% STR 59 1.93% BR6OX2/CYP85A2 59 1.93% RAS 48 1.57% SMT1/SMT2/SMT3 46 1.5% CODM/T6ODM 43 1.41% PYKS 42 1.37% CSE 41 1.34% CYP71 41 1.34% COMT 40 1.31% HCT 39 1.28% T16H 37 1.21% LAC 37 1.21% PMT 36 1.18% TRI/TRII 33 1.08% IFR 31 1.01% CAD 30 0.98% H6H 29 0.95% SGD 27 0.88% CYP90D1 27 0.88% 16OMT 25 0.82% SLS 24 0.79% GS 24 0.79% PAL 24 0.79% CAS 23 0.75% CCR 22 0.72% G8O/G8H 21 0.69% GES 19 0.62% TPS 19 0.62% ANR 18 0.59% F5H/CYP84A 17 0.56% LAMT 15 0.49% IO 15 0.49% CHS 15 0.49% FNS 15 0.49% CPD/CYP90A1 14 0.46% BR6OX1/CYP85A1 14 0.46% COR 13 0.43% DFR 13 0.43% CYP51G1 13 0.43% 7DLH 12 0.39% 8HGO 12 0.39% NCS 11 0.36% F3'5'H/CYP75A 11 0.36% BBE 9 0.29% CCoAOMT 9 0.29% CPR 9 0.29% SMO1/SMO2 9 0.29% AACT 9 0.29% GGPPS 9 0.29% MPO 8 0.26% CYP719 8 0.26% SQS/FDFT1 8 0.26% MVD 8 0.26% DXS 7 0.23% CNMT 6 0.2% ROT3/CYP90C1 6 0.2% CYP80B1 5 0.16% HPPR 5 0.16% SQE 5 0.16% FPPS 5 0.16% ADC 4 0.13% ISY 4 0.13% TDC 4 0.13% CHI 4 0.13% ANS/LDOX 4 0.13% TAT 4 0.13% DWF7 4 0.13% DET2 4 0.13% MVK 4 0.13% IDI 4 0.13% TYDC_DDC 3 0.1% DWF1 3 0.1% HMGR 3 0.1% HMGS 3 0.1% FLS 2 0.07% FK 2 0.07% CPI1 2 0.07% DXR 2 0.07% HDR/IspH 2 0.07% MDS/IspF 2 0.07% MCT/IspD 2 0.07% 6OMT_4OMT_SOMT 1 0.03% HYD1 1 0.03% DWF5 1 0.03% HDS/IspG 1 0.03% PMK 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 345 17 BAHD (159) View species results
Phenylpropanoid pathway 331 11 POD (148) View species results
Alkaloid pathway 295 19 7DLGT (55) View species results
Flavonoid pathway 150 9 UFGT (84) View species results
Rosmarinic acid pathway 102 7 C4H (36) View species results
Steroid pathway 75 11 SMT1/SMT2/SMT3 (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1126 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 289 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: MDS/IspF
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Gene Pathway Family Confidence Status Best Target
Msch04G0032510.1 Terpenoid MDS/IspF high pass MDS_IspF__00001__sp_Q6EPN6_ISPF_ORYSJ
Msch05G0002980.1 Terpenoid MDS/IspF high pass MDS_IspF__00001__sp_Q6EPN6_ISPF_ORYSJ