Nelumbo lutea (nelumbo_lutea)
/
Imported from atlas release summary for Nelumbo lutea.
1195
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1195
Candidate Genes
BAHD
6.49%
C4H
5.88%
POD
5.54%
C3'H/CYP98A
5.09%
4CL
4.64%
IFS
4.03%
UGT
3.73%
NMT
3.13%
Other Families
61.46%
More Families (97)
7DLGT
81
3.05%
CYP76
80
3.02%
UFGT
76
2.87%
T3O
75
2.83%
F3H
61
2.3%
DWF4/CYP90B1
58
2.19%
STR
50
1.89%
BR6OX2/CYP85A2
46
1.73%
CODM/T6ODM
39
1.47%
F3'H/CYP75B
38
1.43%
H6H
37
1.4%
CAD
36
1.36%
CSE
34
1.28%
HCT
32
1.21%
TRI/TRII
31
1.17%
PAL
30
1.13%
LAC
30
1.13%
SMT1/SMT2/SMT3
30
1.13%
IFR
29
1.09%
COMT
27
1.02%
CYP71
27
1.02%
RAS
25
0.94%
ANR
24
0.9%
T16H
23
0.87%
G8O/G8H
23
0.87%
SGD
23
0.87%
CAS
22
0.83%
TPS
22
0.83%
PMT
21
0.79%
PYKS
21
0.79%
7DLH
20
0.75%
NCS
19
0.72%
GS
17
0.64%
FNS
17
0.64%
CCR
17
0.64%
BR6OX1/CYP85A1
17
0.64%
GES
16
0.6%
8HGO
16
0.6%
COR
16
0.6%
BBE
14
0.53%
IO
14
0.53%
F5H/CYP84A
14
0.53%
CPD/CYP90A1
14
0.53%
TYDC_DDC
13
0.49%
ANS/LDOX
13
0.49%
CYP90D1
13
0.49%
F3'5'H/CYP75A
12
0.45%
CYP51G1
12
0.45%
LAMT
11
0.41%
16OMT
10
0.38%
SLS
9
0.34%
ROT3/CYP90C1
9
0.34%
TDC
8
0.3%
TAT
8
0.3%
CYP719
7
0.26%
CNMT
7
0.26%
CCoAOMT
7
0.26%
CPR
7
0.26%
CYP80B1
6
0.23%
DFR
6
0.23%
CHI
6
0.23%
6OMT_4OMT_SOMT
5
0.19%
XMT_MXMT_DXMT
5
0.19%
SMO1/SMO2
5
0.19%
MVK
5
0.19%
FPPS
5
0.19%
GGPPS
5
0.19%
MVD
5
0.19%
MPO
4
0.15%
ODC
4
0.15%
FLS
4
0.15%
DET2
4
0.15%
ISY
3
0.11%
ADC
3
0.11%
CHS
3
0.11%
DWF1
3
0.11%
SQE
3
0.11%
PMK
3
0.11%
AACT
3
0.11%
HDS/IspG
3
0.11%
MCT/IspD
3
0.11%
HMGR
3
0.11%
CYP80F1
2
0.08%
HPPR
2
0.08%
HYD1
2
0.08%
DWF7
2
0.08%
SQS/FDFT1
2
0.08%
HMGS
2
0.08%
IDI
2
0.08%
DXS
2
0.08%
FK
1
0.04%
CPI1
1
0.04%
DWF5
1
0.04%
MDS/IspF
1
0.04%
DXR
1
0.04%
HDR/IspH
1
0.04%
CMK/IspE
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 314 | 19 | BAHD (137) | View species results |
| Phenylpropanoid pathway | 306 | 13 | POD (141) | View species results |
| Alkaloid pathway | 278 | 21 | NMT (57) | View species results |
| Flavonoid pathway | 141 | 13 | UFGT (71) | View species results |
| Rosmarinic acid pathway | 96 | 7 | 4CL (31) | View species results |
| Steroid pathway | 60 | 14 | CAS (22) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 917 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 229 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| nelumbo_lutea_NL1g_02100.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| nelumbo_lutea_NL1g_03193.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| nelumbo_lutea_NL1g_07903.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL1g_07908.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL1g_07911.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL1g_08229.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| nelumbo_lutea_NL1g_08984.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| nelumbo_lutea_NL2g_09595.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL2g_10173.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL2g_10349.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| nelumbo_lutea_NL2g_12462.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL2g_12884.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL2g_13407.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL2g_13864.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL3g_15111.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL3g_15330.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL3g_15951.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL3g_19177.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL3g_19888.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL4g_20636.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL4g_21307.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| nelumbo_lutea_NL4g_21495.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL4g_23252.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL4g_23253.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL4g_23520.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL4g_23903.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| nelumbo_lutea_NL5g_28564.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| nelumbo_lutea_NL6g_30725.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| nelumbo_lutea_NL6g_30776.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| nelumbo_lutea_NL7g_34298.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| nelumbo_lutea_NL7g_34858.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |