PlantSME Plant secondary metabolism enzyme database

Olyra latifolia (olyra_latifolia)

Imported from atlas release summary for Olyra latifolia.

1787
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.43% Phenylpropanoid pathway 21.15% Alkaloid pathway 20.65% Flavonoid pathway 14.38% Rosmarinic acid pathway 9.85% Steroid pathway 5.54%
Family Distribution
C4H 6.81% C3'H/CYP98A 6.21% BAHD 5.78% UGT 4.72% POD 4.53% 7DLGT 4.37% UFGT 4.14% T3O 3.57%
Other Families 59.87%
More Families (97)
CYP76 142 3.27% F3'H/CYP75B 133 3.06% IFS 133 3.06% 4CL 126 2.9% DWF4/CYP90B1 110 2.53% BR6OX2/CYP85A2 98 2.25% CYP71 97 2.23% F3H 87 2.0% NMT 72 1.66% SMT1/SMT2/SMT3 69 1.59% STR 61 1.4% RAS 55 1.27% CAS 52 1.2% G8O/G8H 49 1.13% CAD 48 1.1% TPS 48 1.1% CODM/T6ODM 47 1.08% PYKS 44 1.01% LAC 44 1.01% HCT 44 1.01% PMT 43 0.99% TRI/TRII 41 0.94% T16H 40 0.92% SLS 40 0.92% H6H 39 0.9% GES 39 0.9% CSE 39 0.9% CCR 36 0.83% ANR 35 0.81% SGD 32 0.74% F3'5'H/CYP75A 32 0.74% F5H/CYP84A 31 0.71% IFR 29 0.67% COMT 29 0.67% CYP51G1 28 0.64% 16OMT 25 0.58% IO 24 0.55% FNS 24 0.55% CYP90D1 24 0.55% PAL 21 0.48% GS 20 0.46% CHS 19 0.44% BR6OX1/CYP85A1 19 0.44% NCS 18 0.41% COR 17 0.39% DFR 16 0.37% TAT 15 0.35% CPD/CYP90A1 15 0.35% BBE 14 0.32% 8HGO 14 0.32% CNMT 11 0.25% LAMT 11 0.25% CPR 11 0.25% CYP719 10 0.23% 7DLH 10 0.23% ANS/LDOX 9 0.21% ROT3/CYP90C1 9 0.21% FPPS 8 0.18% MPO 7 0.16% TYDC_DDC 7 0.16% CCoAOMT 7 0.16% GGPPS 7 0.16% AACT 7 0.16% XMT_MXMT_DXMT 6 0.14% ISY 6 0.14% HPPR 6 0.14% SQS/FDFT1 6 0.14% DWF1 6 0.14% HMGS 6 0.14% MVK 6 0.14% TDC 5 0.12% CYP80B1 5 0.12% CHI 4 0.09% SQE 4 0.09% SMO1/SMO2 4 0.09% MVD 4 0.09% DXS 4 0.09% MDS/IspF 4 0.09% 6OMT_4OMT_SOMT 3 0.07% ADC 3 0.07% FLS 3 0.07% HMGR 3 0.07% HDR/IspH 3 0.07% MCT/IspD 3 0.07% CYP80F1 2 0.05% CPI1 2 0.05% DET2 2 0.05% IDI 2 0.05% ODC 1 0.02% DWF5 1 0.02% HYD1 1 0.02% FK 1 0.02% DWF7 1 0.02% DXR 1 0.02% HDS/IspG 1 0.02% CMK/IspE 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 UGT (189) View species results
Phenylpropanoid pathway 378 12 POD (190) View species results
Alkaloid pathway 369 23 7DLGT (85) View species results
Flavonoid pathway 257 11 UFGT (172) View species results
Rosmarinic acid pathway 176 7 C4H (93) View species results
Steroid pathway 99 14 SMT1/SMT2/SMT3 (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1772 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 350 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Olatscaffold1030009720 Steroid CYP90D1 medium borderline
Olatscaffold1060013920 Steroid CYP90D1 low borderline
Olatscaffold1210031550 Steroid CYP90D1 low borderline
Olatscaffold1210031580 Steroid CYP90D1 low borderline
Olatscaffold1360048260 Steroid CYP90D1 low borderline
Olatscaffold1430057050 Steroid CYP90D1 medium borderline
Olatscaffold160071370 Steroid CYP90D1 low borderline
Olatscaffold1710090730 Steroid CYP90D1 low borderline
Olatscaffold1750093550 Steroid CYP90D1 low borderline
Olatscaffold1840101630 Steroid CYP90D1 low borderline
Olatscaffold1840101640 Steroid CYP90D1 low borderline
Olatscaffold2250136230 Steroid CYP90D1 low borderline
Olatscaffold2750166720 Steroid CYP90D1 low borderline
Olatscaffold2760167270 Steroid CYP90D1 medium borderline
Olatscaffold300182720 Steroid CYP90D1 low borderline
Olatscaffold30179840 Steroid CYP90D1 medium borderline
Olatscaffold430243560 Steroid CYP90D1 medium pass
Olatscaffold5250278030 Steroid CYP90D1 medium borderline
Olatscaffold5630288230 Steroid CYP90D1 low borderline
Olatscaffold650313290 Steroid CYP90D1 medium borderline
Olatscaffold710327370 Steroid CYP90D1 low borderline
Olatscaffold730329660 Steroid CYP90D1 medium borderline
Olatscaffold800342680 Steroid CYP90D1 medium borderline
Olatscaffold960362410 Steroid CYP90D1 low borderline