PlantSME Plant secondary metabolism enzyme database

Olyra latifolia (olyra_latifolia)

Imported from atlas release summary for Olyra latifolia.

1787
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.43% Phenylpropanoid pathway 21.15% Alkaloid pathway 20.65% Flavonoid pathway 14.38% Rosmarinic acid pathway 9.85% Steroid pathway 5.54%
Family Distribution
C4H 6.81% C3'H/CYP98A 6.21% BAHD 5.78% UGT 4.72% POD 4.53% 7DLGT 4.37% UFGT 4.14% T3O 3.57%
Other Families 59.87%
More Families (97)
CYP76 142 3.27% F3'H/CYP75B 133 3.06% IFS 133 3.06% 4CL 126 2.9% DWF4/CYP90B1 110 2.53% BR6OX2/CYP85A2 98 2.25% CYP71 97 2.23% F3H 87 2.0% NMT 72 1.66% SMT1/SMT2/SMT3 69 1.59% STR 61 1.4% RAS 55 1.27% CAS 52 1.2% G8O/G8H 49 1.13% CAD 48 1.1% TPS 48 1.1% CODM/T6ODM 47 1.08% PYKS 44 1.01% LAC 44 1.01% HCT 44 1.01% PMT 43 0.99% TRI/TRII 41 0.94% T16H 40 0.92% SLS 40 0.92% H6H 39 0.9% GES 39 0.9% CSE 39 0.9% CCR 36 0.83% ANR 35 0.81% SGD 32 0.74% F3'5'H/CYP75A 32 0.74% F5H/CYP84A 31 0.71% IFR 29 0.67% COMT 29 0.67% CYP51G1 28 0.64% 16OMT 25 0.58% IO 24 0.55% FNS 24 0.55% CYP90D1 24 0.55% PAL 21 0.48% GS 20 0.46% CHS 19 0.44% BR6OX1/CYP85A1 19 0.44% NCS 18 0.41% COR 17 0.39% DFR 16 0.37% TAT 15 0.35% CPD/CYP90A1 15 0.35% BBE 14 0.32% 8HGO 14 0.32% CNMT 11 0.25% LAMT 11 0.25% CPR 11 0.25% CYP719 10 0.23% 7DLH 10 0.23% ANS/LDOX 9 0.21% ROT3/CYP90C1 9 0.21% FPPS 8 0.18% MPO 7 0.16% TYDC_DDC 7 0.16% CCoAOMT 7 0.16% GGPPS 7 0.16% AACT 7 0.16% XMT_MXMT_DXMT 6 0.14% ISY 6 0.14% HPPR 6 0.14% SQS/FDFT1 6 0.14% DWF1 6 0.14% HMGS 6 0.14% MVK 6 0.14% TDC 5 0.12% CYP80B1 5 0.12% CHI 4 0.09% SQE 4 0.09% SMO1/SMO2 4 0.09% MVD 4 0.09% DXS 4 0.09% MDS/IspF 4 0.09% 6OMT_4OMT_SOMT 3 0.07% ADC 3 0.07% FLS 3 0.07% HMGR 3 0.07% HDR/IspH 3 0.07% MCT/IspD 3 0.07% CYP80F1 2 0.05% CPI1 2 0.05% DET2 2 0.05% IDI 2 0.05% ODC 1 0.02% DWF5 1 0.02% HYD1 1 0.02% FK 1 0.02% DWF7 1 0.02% DXR 1 0.02% HDS/IspG 1 0.02% CMK/IspE 1 0.02% PMK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 508 19 UGT (189) View species results
Phenylpropanoid pathway 378 12 POD (190) View species results
Alkaloid pathway 369 23 7DLGT (85) View species results
Flavonoid pathway 257 11 UFGT (172) View species results
Rosmarinic acid pathway 176 7 C4H (93) View species results
Steroid pathway 99 14 SMT1/SMT2/SMT3 (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1772 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 350 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Olatscaffold1210030750 Flavonoid IFR medium pass
Olatscaffold1210030760 Flavonoid IFR high pass
Olatscaffold1270037180 Flavonoid IFR high pass
Olatscaffold1300041180 Flavonoid IFR low borderline
Olatscaffold1380050270 Flavonoid IFR low borderline
Olatscaffold1550068090 Flavonoid IFR low borderline
Olatscaffold1600072610 Flavonoid IFR low borderline
Olatscaffold1900106160 Flavonoid IFR high pass
Olatscaffold2170131210 Flavonoid IFR low borderline
Olatscaffold2280137860 Flavonoid IFR low borderline
Olatscaffold2370144540 Flavonoid IFR low borderline
Olatscaffold240146220 Flavonoid IFR low borderline
Olatscaffold2790168230 Flavonoid IFR low borderline
Olatscaffold2880173200 Flavonoid IFR low borderline
Olatscaffold290174800 Flavonoid IFR low borderline
Olatscaffold3790222570 Flavonoid IFR medium pass
Olatscaffold5020271650 Flavonoid IFR low borderline
Olatscaffold5320280440 Flavonoid IFR medium pass
Olatscaffold5510285580 Flavonoid IFR high pass
Olatscaffold5510285590 Flavonoid IFR high pass
Olatscaffold600301150 Flavonoid IFR low borderline
Olatscaffold620306050 Flavonoid IFR low borderline
Olatscaffold630308070 Flavonoid IFR high pass
Olatscaffold630309440 Flavonoid IFR low borderline
Olatscaffold6330310010 Flavonoid IFR low borderline
Olatscaffold640311420 Flavonoid IFR low borderline
Olatscaffold650313100 Flavonoid IFR low borderline
Olatscaffold850349290 Flavonoid IFR low borderline
Olatscaffold860350240 Flavonoid IFR low borderline