PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

2062
Candidate Protein Records
1654
Pathway-Level Records
4584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Opum08G0005310.1 Alkaloid GES low borderline
Opum08G0005320.1 Alkaloid GES low borderline
Opum08G0005370.1 Alkaloid GES medium pass
Opum08G0005440.1 Alkaloid GES medium pass
Opum08G0005460.1 Alkaloid GES medium pass
Opum08G0005570.1 Alkaloid GES medium pass
Opum08G0005890.1 Alkaloid GES medium pass
Opum08G0005990.1 Alkaloid GES low borderline
Opum08G0006020.1 Alkaloid GES medium pass
Opum08G0006110.1 Alkaloid GES medium pass
Opum08G0006170.1 Alkaloid GES low borderline
Opum08G0007670.1 Alkaloid GES medium pass
Opum09G0008780.1 Alkaloid GES low borderline
Opum09G0008800.1 Alkaloid GES low borderline
Opum09G0008840.1 Alkaloid GES medium pass
Opum09G0009880.1 Alkaloid GES medium pass
Opum09G0025210.1 Alkaloid GES medium pass
Opum10G0009850.1 Alkaloid GES medium pass
Opum10G0009860.1 Alkaloid GES medium pass
Opum10G0009870.1 Alkaloid GES medium pass
Opum10G0009880.1 Alkaloid GES medium pass
Opum11G0014320.1 Alkaloid GES medium pass
Opum11G0014340.1 Alkaloid GES low borderline
Opum01G0022780.1 Alkaloid GS low borderline
Opum01G0022800.1 Alkaloid GS low borderline
Opum01G0022810.1 Alkaloid GS low borderline
Opum01G0026940.1 Alkaloid GS medium pass
Opum02G0002690.1 Alkaloid GS high pass
Opum02G0005410.1 Alkaloid GS low borderline
Opum02G0029700.1 Alkaloid GS high pass
Opum03G0021140.1 Alkaloid GS medium pass
Opum03G0021150.1 Alkaloid GS medium pass
Opum04G0009290.1 Alkaloid GS medium pass
Opum05G0018630.1 Alkaloid GS low borderline
Opum07G0001790.1 Alkaloid GS low borderline
Opum07G0008490.1 Alkaloid GS medium pass
Opum07G0008530.1 Alkaloid GS high pass
Opum07G0008540.1 Alkaloid GS high pass
Opum07G0008580.1 Alkaloid GS high pass
Opum07G0008590.1 Alkaloid GS medium pass
Opum07G0008600.1 Alkaloid GS high pass
Opum07G0008610.1 Alkaloid GS high pass
Opum07G0008620.1 Alkaloid GS high pass
Opum07G0008630.1 Alkaloid GS high pass
Opum07G0024400.1 Alkaloid GS medium pass
Opum07G0024470.1 Alkaloid GS high pass
Opum08G0017310.1 Alkaloid GS high pass
Opum08G0017320.1 Alkaloid GS high pass
Opum08G0017340.1 Alkaloid GS high pass
Opum09G0003430.1 Alkaloid GS medium pass