PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

2062
Candidate Protein Records
1654
Pathway-Level Records
4584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Opum03G0016600.1 Alkaloid G8O/G8H low borderline
Opum03G0016610.1 Alkaloid G8O/G8H medium borderline
Opum03G0016660.1 Alkaloid G8O/G8H low borderline
Opum03G0016670.1 Alkaloid G8O/G8H low borderline
Opum03G0016680.1 Alkaloid G8O/G8H medium borderline
Opum04G0010960.1 Alkaloid G8O/G8H medium borderline
Opum04G0011020.1 Alkaloid G8O/G8H medium borderline
Opum04G0012720.1 Alkaloid G8O/G8H medium borderline
Opum04G0021090.1 Alkaloid G8O/G8H medium borderline
Opum04G0021100.1 Alkaloid G8O/G8H medium borderline
Opum05G0001530.1 Alkaloid G8O/G8H medium borderline
Opum05G0002910.1 Alkaloid G8O/G8H medium borderline
Opum05G0003670.1 Alkaloid G8O/G8H low borderline
Opum05G0022200.1 Alkaloid G8O/G8H medium borderline
Opum06G0026590.1 Alkaloid G8O/G8H medium borderline
Opum06G0026600.1 Alkaloid G8O/G8H medium borderline
Opum06G0026710.1 Alkaloid G8O/G8H medium borderline
Opum06G0026720.1 Alkaloid G8O/G8H medium pass
Opum06G0026780.1 Alkaloid G8O/G8H medium pass
Opum06G0035540.1 Alkaloid G8O/G8H medium borderline
Opum07G0007160.1 Alkaloid G8O/G8H medium borderline
Opum07G0023190.1 Alkaloid G8O/G8H medium pass
Opum07G0023230.1 Alkaloid G8O/G8H medium pass
Opum07G0023240.1 Alkaloid G8O/G8H medium pass
Opum08G0017420.1 Alkaloid G8O/G8H medium borderline
Opum09G0006660.1 Alkaloid G8O/G8H medium borderline
Opum09G0015770.1 Alkaloid G8O/G8H medium borderline
Opum10G0004890.1 Alkaloid G8O/G8H medium borderline
Opum10G0004900.1 Alkaloid G8O/G8H medium borderline
Opum10G0004970.1 Alkaloid G8O/G8H medium borderline
Opum10G0010330.1 Alkaloid G8O/G8H medium borderline
Opum11G0003300.1 Alkaloid G8O/G8H medium borderline
Opum11G0006410.1 Alkaloid G8O/G8H low borderline
Opum11G0018930.1 Alkaloid G8O/G8H low borderline
Opum01G0025860.1 Alkaloid GES low borderline
Opum02G0009630.1 Alkaloid GES medium pass
Opum02G0009730.1 Alkaloid GES medium pass
Opum02G0024850.1 Alkaloid GES medium pass
Opum02G0024860.1 Alkaloid GES medium pass
Opum02G0027140.1 Alkaloid GES low borderline
Opum02G0028180.1 Alkaloid GES medium pass
Opum04G0010250.1 Alkaloid GES medium pass
Opum04G0010260.1 Alkaloid GES low borderline
Opum04G0013250.1 Alkaloid GES low borderline
Opum04G0013270.1 Alkaloid GES medium pass
Opum04G0017090.1 Alkaloid GES medium pass
Opum05G0003810.1 Alkaloid GES medium pass
Opum05G0003820.1 Alkaloid GES medium pass
Opum05G0024000.1 Alkaloid GES medium pass
Opum06G0014290.1 Alkaloid GES medium pass