PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

2062
Candidate Protein Records
1654
Pathway-Level Records
4584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Opum05G0015420.1 Alkaloid 7DLH medium borderline
Opum05G0015440.1 Alkaloid 7DLH medium borderline
Opum05G0015450.1 Alkaloid 7DLH medium borderline
Opum05G0015460.1 Alkaloid 7DLH medium borderline
Opum05G0015480.1 Alkaloid 7DLH medium borderline
Opum05G0017420.1 Alkaloid 7DLH medium borderline
Opum05G0017440.1 Alkaloid 7DLH medium borderline
Opum06G0021120.1 Alkaloid 7DLH medium borderline
Opum06G0035850.1 Alkaloid 7DLH medium borderline
Opum07G0009740.1 Alkaloid 7DLH medium pass
Opum07G0009750.1 Alkaloid 7DLH medium borderline
Opum08G0024320.1 Alkaloid 7DLH medium borderline
Opum09G0002700.1 Alkaloid 7DLH medium borderline
Opum09G0005070.1 Alkaloid 7DLH medium borderline
Opum09G0010920.1 Alkaloid 7DLH medium borderline
Opum09G0026060.1 Alkaloid 7DLH medium borderline
Opum09G0026110.1 Alkaloid 7DLH medium borderline
Opum09G0028970.1 Alkaloid 7DLH low borderline
Opum09G0031670.1 Alkaloid 7DLH medium borderline
Opum09G0032570.1 Alkaloid 7DLH low borderline
Opum11G0008500.1 Alkaloid 7DLH low borderline
Opum11G0023200.1 Alkaloid 7DLH medium borderline
Opum01G0023940.1 Alkaloid 8HGO medium borderline
Opum04G0024140.1 Alkaloid 8HGO medium borderline
Opum07G0011070.1 Alkaloid 8HGO medium pass
Opum07G0011080.1 Alkaloid 8HGO medium borderline
Opum07G0011090.1 Alkaloid 8HGO medium borderline
Opum08G0003720.1 Alkaloid 8HGO medium borderline
Opum08G0026240.1 Alkaloid 8HGO medium borderline
Opum09G0000120.1 Alkaloid 8HGO medium borderline
Opum10G0000840.1 Alkaloid 8HGO medium borderline
Opum10G0008070.1 Alkaloid 8HGO medium borderline
Opum10G0021890.1 Alkaloid 8HGO medium borderline
Opum02G0031940.1 Alkaloid ADC medium pass
Opum01G0004500.1 Alkaloid BBE medium borderline
Opum01G0008230.1 Alkaloid BBE low borderline
Opum01G0017350.1 Alkaloid BBE medium borderline
Opum01G0017590.1 Alkaloid BBE medium borderline
Opum01G0018520.1 Alkaloid BBE medium borderline
Opum03G0011550.1 Alkaloid BBE medium borderline
Opum03G0017890.1 Alkaloid BBE medium borderline
Opum03G0017900.1 Alkaloid BBE medium borderline
Opum04G0010930.1 Alkaloid BBE medium borderline
Opum04G0021360.1 Alkaloid BBE medium borderline
Opum04G0021370.1 Alkaloid BBE medium borderline
Opum04G0023410.1 Alkaloid BBE medium borderline
Opum05G0000600.1 Alkaloid BBE low borderline
Opum05G0003140.1 Alkaloid BBE medium borderline
Opum05G0003150.1 Alkaloid BBE medium borderline
Opum05G0003160.1 Alkaloid BBE medium borderline