PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

2062
Candidate Protein Records
1654
Pathway-Level Records
4584
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Opum05G0003180.1 Alkaloid BBE medium borderline
Opum05G0003190.1 Alkaloid BBE medium borderline
Opum05G0003200.1 Alkaloid BBE medium borderline
Opum05G0003210.1 Alkaloid BBE medium borderline
Opum06G0019670.1 Alkaloid BBE low borderline
Opum06G0020660.1 Alkaloid BBE medium borderline
Opum07G0008100.1 Alkaloid BBE medium borderline
Opum07G0008570.1 Alkaloid BBE medium borderline
Opum07G0020660.1 Alkaloid BBE medium borderline
Opum07G0020670.1 Alkaloid BBE medium borderline
Opum07G0021950.1 Alkaloid BBE medium borderline
Opum07G0022300.1 Alkaloid BBE medium borderline
Opum07G0030050.1 Alkaloid BBE medium borderline
Opum08G0003000.1 Alkaloid BBE low borderline
Opum09G0013610.1 Alkaloid BBE medium borderline
Opum09G0014420.1 Alkaloid BBE medium borderline
Opum09G0015130.1 Alkaloid BBE low borderline
Opum09G0024260.1 Alkaloid BBE medium borderline
Opum09G0024530.1 Alkaloid BBE medium borderline
Opum09G0026480.1 Alkaloid BBE medium borderline
Opum09G0026490.1 Alkaloid BBE low borderline
Opum09G0026500.1 Alkaloid BBE medium borderline
Opum09G0026510.1 Alkaloid BBE medium borderline
Opum09G0026540.1 Alkaloid BBE medium borderline
Opum09G0026570.1 Alkaloid BBE medium borderline
Opum09G0026600.1 Alkaloid BBE medium borderline
Opum09G0026610.1 Alkaloid BBE medium borderline
Opum09G0026640.1 Alkaloid BBE low borderline
Opum09G0026650.1 Alkaloid BBE medium borderline
Opum09G0026690.1 Alkaloid BBE medium borderline
Opum09G0026760.1 Alkaloid BBE medium borderline
Opum09G0026790.1 Alkaloid BBE medium borderline
Opum09G0026800.1 Alkaloid BBE medium borderline
Opum09G0026810.1 Alkaloid BBE medium borderline
Opum09G0026820.1 Alkaloid BBE medium borderline
Opum09G0026830.1 Alkaloid BBE medium borderline
Opum09G0026840.1 Alkaloid BBE medium borderline
Opum09G0026900.1 Alkaloid BBE medium borderline
Opum09G0026910.1 Alkaloid BBE medium borderline
Opum09G0026920.1 Alkaloid BBE medium borderline
Opum09G0026930.1 Alkaloid BBE medium borderline
Opum09G0027280.1 Alkaloid BBE medium borderline
Opum09G0027440.1 Alkaloid BBE medium borderline
Opum09G0027470.1 Alkaloid BBE medium borderline
Opum10G0000930.1 Alkaloid BBE low borderline
Opum10G0009160.1 Alkaloid BBE medium borderline
Opum10G0023240.1 Alkaloid BBE medium borderline
Opum11G0008140.1 Alkaloid BBE medium borderline
Opum03G0006240.1 Alkaloid CNMT medium pass
Opum03G0018550.1 Alkaloid CNMT low borderline