PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

1654
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Opum03G0018570.1 Alkaloid CNMT medium pass
Opum04G0005570.1 Alkaloid CNMT low borderline
Opum05G0015770.1 Alkaloid CNMT low borderline
Opum06G0031350.1 Alkaloid CNMT low borderline
Opum06G0039310.1 Alkaloid CNMT low borderline
Opum08G0001540.1 Alkaloid CNMT medium borderline
Opum09G0015180.1 Alkaloid CNMT low borderline
Opum09G0024120.1 Alkaloid CNMT medium borderline
Opum09G0024160.1 Alkaloid CNMT medium borderline
Opum10G0016870.1 Alkaloid CNMT medium borderline
Opum11G0023670.1 Alkaloid CNMT low borderline
Opum01G0001870.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0006070.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0006110.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0006140.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0006240.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0007480.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0010100.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0010110.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0018220.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0018230.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0018270.1 Alkaloid CODM/T6ODM medium borderline
Opum01G0028230.1 Alkaloid CODM/T6ODM medium borderline
Opum02G0002100.1 Alkaloid CODM/T6ODM medium borderline
Opum02G0003090.1 Alkaloid CODM/T6ODM medium borderline
Opum02G0028000.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005230.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005260.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005270.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005280.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005290.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005360.1 Alkaloid CODM/T6ODM medium borderline
Opum03G0005390.1 Alkaloid CODM/T6ODM medium borderline
Opum04G0003460.1 Alkaloid CODM/T6ODM medium borderline
Opum04G0004300.1 Alkaloid CODM/T6ODM medium borderline
Opum04G0022090.1 Alkaloid CODM/T6ODM medium borderline
Opum05G0007070.1 Alkaloid CODM/T6ODM medium borderline
Opum05G0017250.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0001480.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0002930.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0006320.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0008500.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0034760.1 Alkaloid CODM/T6ODM medium borderline
Opum06G0039420.1 Alkaloid CODM/T6ODM medium borderline
Opum07G0005880.1 Alkaloid CODM/T6ODM medium borderline
Opum07G0013020.1 Alkaloid CODM/T6ODM medium borderline
Opum07G0013040.1 Alkaloid CODM/T6ODM low borderline
Opum07G0014060.1 Alkaloid CODM/T6ODM low borderline
Opum08G0004440.1 Alkaloid CODM/T6ODM medium borderline
Opum08G0020350.1 Alkaloid CODM/T6ODM medium borderline