PlantSME Plant secondary metabolism enzyme database

Ophiorrhiza pumila (ophiorrhiza_pumila)

Imported from atlas release summary for Ophiorrhiza pumila.

1654
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 503 19 BAHD (190) View species results
Alkaloid pathway 402 24 7DLGT (62) View species results
Phenylpropanoid pathway 293 11 POD (112) View species results
Flavonoid pathway 203 13 UFGT (146) View species results
Rosmarinic acid pathway 137 7 C4H (56) View species results
Steroid pathway 116 12 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2055 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 307 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Opum08G0023110.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0000740.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0003560.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0004840.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0006500.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0008470.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0014080.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0014100.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0014120.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0014130.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0014140.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0019380.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0026530.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0030530.1 Alkaloid CODM/T6ODM medium borderline
Opum09G0036830.1 Alkaloid CODM/T6ODM medium borderline
Opum10G0011640.1 Alkaloid CODM/T6ODM medium borderline
Opum10G0012050.1 Alkaloid CODM/T6ODM low borderline
Opum10G0019370.1 Alkaloid CODM/T6ODM medium borderline
Opum11G0002880.1 Alkaloid CODM/T6ODM medium borderline
Opum11G0019690.1 Alkaloid CODM/T6ODM medium borderline
Opum04G0008810.1 Alkaloid COR medium pass
Opum04G0008820.1 Alkaloid COR medium pass
Opum04G0008840.1 Alkaloid COR medium pass
Opum05G0000290.1 Alkaloid COR low borderline
Opum06G0038440.1 Alkaloid COR medium pass
Opum06G0038450.1 Alkaloid COR medium pass
Opum06G0038460.1 Alkaloid COR medium pass
Opum09G0004260.1 Alkaloid COR medium pass
Opum11G0004950.1 Alkaloid COR medium pass
Opum11G0004980.1 Alkaloid COR medium pass
Opum11G0014050.1 Alkaloid COR medium pass
Opum11G0025530.1 Alkaloid COR medium pass
Opum05G0015930.1 Alkaloid CYP719 medium borderline
Opum08G0001760.1 Alkaloid CYP719 medium borderline
Opum08G0018330.1 Alkaloid CYP719 low borderline
Opum09G0004960.1 Alkaloid CYP719 medium borderline
Opum09G0035450.1 Alkaloid CYP719 medium borderline
Opum05G0002480.1 Alkaloid CYP80B1 low borderline
Opum08G0005600.1 Alkaloid CYP80B1 medium borderline
Opum08G0008300.1 Alkaloid CYP80B1 medium borderline
Opum09G0003270.1 Alkaloid CYP80B1 medium borderline
Opum10G0003540.1 Alkaloid CYP80B1 medium borderline
Opum10G0020200.1 Alkaloid CYP80B1 medium borderline
Opum01G0008970.1 Alkaloid G8O/G8H medium pass
Opum01G0008980.1 Alkaloid G8O/G8H medium borderline
Opum02G0010730.1 Alkaloid G8O/G8H medium borderline
Opum02G0010740.1 Alkaloid G8O/G8H medium borderline
Opum03G0002130.1 Alkaloid G8O/G8H low borderline
Opum03G0016540.1 Alkaloid G8O/G8H medium borderline
Opum03G0016590.1 Alkaloid G8O/G8H low borderline