PlantSME Plant secondary metabolism enzyme database

Orthotrichum anomalum (orthotrichum_anomalum)

Imported from atlas release summary for Orthotrichum anomalum.

487
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.46% Terpenoid pathway 25.26% Alkaloid pathway 21.97% Flavonoid pathway 11.5% Rosmarinic acid pathway 10.06% Steroid pathway 5.75%
Family Distribution
BAHD 7.35% 4CL 6.52% POD 5.86% C4H 5.37% C3'H/CYP98A 4.46% NMT 4.13% CYP76 3.55% STR 3.22%
Other Families 59.54%
More Families (94)
F3H 32 2.64% IFR 32 2.64% GS 27 2.23% IFS 27 2.23% T3O 26 2.15% PAL 24 1.98% BR6OX2/CYP85A2 23 1.9% PYKS 22 1.82% F3'H/CYP75B 21 1.73% CYP71 19 1.57% 7DLGT 18 1.49% DWF4/CYP90B1 18 1.49% TRI/TRII 17 1.4% UFGT 17 1.4% UGT 17 1.4% CODM/T6ODM 16 1.32% IO 16 1.32% HCT 15 1.24% SMT1/SMT2/SMT3 15 1.24% H6H 14 1.16% CHS 14 1.16% SGD 11 0.91% CAD 11 0.91% RAS 11 0.91% F3'5'H/CYP75A 9 0.74% LAC 9 0.74% 8HGO 8 0.66% T16H 8 0.66% CAS 8 0.66% CNMT 7 0.58% PMT 7 0.58% G8O/G8H 7 0.58% CSE 7 0.58% GGPPS 7 0.58% SLS 6 0.5% COR 6 0.5% NCS 6 0.5% FNS 6 0.5% ANR 6 0.5% CPR 6 0.5% TAT 6 0.5% SQS/FDFT1 6 0.5% CYP90D1 6 0.5% AACT 6 0.5% F5H/CYP84A 5 0.41% COMT 5 0.41% CPD/CYP90A1 5 0.41% TDC 4 0.33% ISY 4 0.33% 16OMT 4 0.33% BBE 4 0.33% CCR 4 0.33% SQE 4 0.33% DWF5 4 0.33% LAMT 3 0.25% MPO 3 0.25% TYDC_DDC 3 0.25% CYP719 3 0.25% DFR 3 0.25% CHI 3 0.25% DET2 3 0.25% CYP51G1 3 0.25% MVD 3 0.25% MCT/IspD 3 0.25% MVK 3 0.25% 7DLH 2 0.17% ADC 2 0.17% CYP80B1 2 0.17% FLS 2 0.17% CCoAOMT 2 0.17% HPPR 2 0.17% ROT3/CYP90C1 2 0.17% SMO1/SMO2 2 0.17% BR6OX1/CYP85A1 2 0.17% HYD1 2 0.17% FPPS 2 0.17% HDR/IspH 2 0.17% DXS 2 0.17% PMK 2 0.17% HDS/IspG 2 0.17% MDS/IspF 2 0.17% GES 1 0.08% 6OMT_4OMT_SOMT 1 0.08% ANS/LDOX 1 0.08% FK 1 0.08% DWF1 1 0.08% DWF7 1 0.08% CPI1 1 0.08% IDI 1 0.08% HMGR 1 0.08% CMK/IspE 1 0.08% TPS 1 0.08% HMGS 1 0.08% DXR 1 0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 124 10 POD (64) View species results
Terpenoid pathway 123 19 BAHD (54) View species results
Alkaloid pathway 107 17 NMT (24) View species results
Flavonoid pathway 56 10 CHS (14) View species results
Rosmarinic acid pathway 49 7 C4H (15) View species results
Steroid pathway 28 12 CAS (7) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 372 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 115 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
orthotrichum_anomalum_jg10018.t1 Alkaloid LAMT low borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
orthotrichum_anomalum_jg6933.t1 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
orthotrichum_anomalum_jg9993.t1 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO