Orthotrichum anomalum (orthotrichum_anomalum)
Imported from atlas release summary for Orthotrichum anomalum.
487
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
487
Candidate Genes
BAHD
7.35%
4CL
6.52%
POD
5.86%
C4H
5.37%
C3'H/CYP98A
4.46%
NMT
4.13%
CYP76
3.55%
STR
3.22%
Other Families
59.54%
More Families (94)
F3H
32
2.64%
IFR
32
2.64%
GS
27
2.23%
IFS
27
2.23%
T3O
26
2.15%
PAL
24
1.98%
BR6OX2/CYP85A2
23
1.9%
PYKS
22
1.82%
F3'H/CYP75B
21
1.73%
CYP71
19
1.57%
7DLGT
18
1.49%
DWF4/CYP90B1
18
1.49%
TRI/TRII
17
1.4%
UFGT
17
1.4%
UGT
17
1.4%
CODM/T6ODM
16
1.32%
IO
16
1.32%
HCT
15
1.24%
SMT1/SMT2/SMT3
15
1.24%
H6H
14
1.16%
CHS
14
1.16%
SGD
11
0.91%
CAD
11
0.91%
RAS
11
0.91%
F3'5'H/CYP75A
9
0.74%
LAC
9
0.74%
8HGO
8
0.66%
T16H
8
0.66%
CAS
8
0.66%
CNMT
7
0.58%
PMT
7
0.58%
G8O/G8H
7
0.58%
CSE
7
0.58%
GGPPS
7
0.58%
SLS
6
0.5%
COR
6
0.5%
NCS
6
0.5%
FNS
6
0.5%
ANR
6
0.5%
CPR
6
0.5%
TAT
6
0.5%
SQS/FDFT1
6
0.5%
CYP90D1
6
0.5%
AACT
6
0.5%
F5H/CYP84A
5
0.41%
COMT
5
0.41%
CPD/CYP90A1
5
0.41%
TDC
4
0.33%
ISY
4
0.33%
16OMT
4
0.33%
BBE
4
0.33%
CCR
4
0.33%
SQE
4
0.33%
DWF5
4
0.33%
LAMT
3
0.25%
MPO
3
0.25%
TYDC_DDC
3
0.25%
CYP719
3
0.25%
DFR
3
0.25%
CHI
3
0.25%
DET2
3
0.25%
CYP51G1
3
0.25%
MVD
3
0.25%
MCT/IspD
3
0.25%
MVK
3
0.25%
7DLH
2
0.17%
ADC
2
0.17%
CYP80B1
2
0.17%
FLS
2
0.17%
CCoAOMT
2
0.17%
HPPR
2
0.17%
ROT3/CYP90C1
2
0.17%
SMO1/SMO2
2
0.17%
BR6OX1/CYP85A1
2
0.17%
HYD1
2
0.17%
FPPS
2
0.17%
HDR/IspH
2
0.17%
DXS
2
0.17%
PMK
2
0.17%
HDS/IspG
2
0.17%
MDS/IspF
2
0.17%
GES
1
0.08%
6OMT_4OMT_SOMT
1
0.08%
ANS/LDOX
1
0.08%
FK
1
0.08%
DWF1
1
0.08%
DWF7
1
0.08%
CPI1
1
0.08%
IDI
1
0.08%
HMGR
1
0.08%
CMK/IspE
1
0.08%
TPS
1
0.08%
HMGS
1
0.08%
DXR
1
0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 124 | 10 | POD (64) | View species results |
| Terpenoid pathway | 123 | 19 | BAHD (54) | View species results |
| Alkaloid pathway | 107 | 17 | NMT (24) | View species results |
| Flavonoid pathway | 56 | 10 | CHS (14) | View species results |
| Rosmarinic acid pathway | 49 | 7 | C4H (15) | View species results |
| Steroid pathway | 28 | 12 | CAS (7) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 372 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 115 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| orthotrichum_anomalum_jg11347.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| orthotrichum_anomalum_jg12321.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| orthotrichum_anomalum_jg12932.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| orthotrichum_anomalum_jg16737.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| orthotrichum_anomalum_jg17413.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| orthotrichum_anomalum_jg17886.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| orthotrichum_anomalum_jg18924.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| orthotrichum_anomalum_jg19860.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| orthotrichum_anomalum_jg2076.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| orthotrichum_anomalum_jg25124.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| orthotrichum_anomalum_jg25125.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| orthotrichum_anomalum_jg25969.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| orthotrichum_anomalum_jg25976.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| orthotrichum_anomalum_jg6325.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| orthotrichum_anomalum_jg8072.t1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| orthotrichum_anomalum_jg8356.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| orthotrichum_anomalum_jg8667.t1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |