PlantSME Plant secondary metabolism enzyme database

Ostreococcus lucimarinus (ostreococcus_lucimarinus)

Imported from atlas release summary for Ostreococcus lucimarinus.

101
Candidate Genes
74
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 41.58% Alkaloid pathway 17.82% Phenylpropanoid pathway 15.84% Steroid pathway 13.86% Rosmarinic acid pathway 6.93% Flavonoid pathway 3.96%
Family Distribution
4CL 10.14% NMT 9.12% BAHD 6.76% CYP71 5.07% IFR 4.73% C4H 3.72% C3'H/CYP98A 3.38% POD 3.04%
Other Families 54.05%
More Families (66)
CNMT 8 2.7% CPR 7 2.36% GS 6 2.03% STR 6 2.03% FNS 6 2.03% CYP76 6 2.03% H6H 5 1.69% SMT1/SMT2/SMT3 5 1.69% SQS/FDFT1 5 1.69% TRI/TRII 4 1.35% F3H 4 1.35% CSE 4 1.35% CAD 4 1.35% T3O 3 1.01% SLS 3 1.01% CCR 3 1.01% TAT 3 1.01% RAS 3 1.01% CPD/CYP90A1 3 1.01% DET2 3 1.01% CAS 3 1.01% CYP90D1 3 1.01% DWF4/CYP90B1 3 1.01% FPPS 3 1.01% GGPPS 3 1.01% 7DLH 2 0.68% CYP719 2 0.68% PMT 2 0.68% CYP80B1 2 0.68% 16OMT 2 0.68% 8HGO 2 0.68% ANS/LDOX 2 0.68% F3'5'H/CYP75A 2 0.68% ANR 2 0.68% HDS/IspG 2 0.68% AACT 2 0.68% MCT/IspD 2 0.68% IDI 2 0.68% CODM/T6ODM 1 0.34% TYDC_DDC 1 0.34% MPO 1 0.34% ODC 1 0.34% GES 1 0.34% T16H 1 0.34% SGD 1 0.34% PYKS 1 0.34% CYP80F1 1 0.34% F3'H/CYP75B 1 0.34% IFS 1 0.34% DFR 1 0.34% CCoAOMT 1 0.34% LAC 1 0.34% HYD1 1 0.34% FK 1 0.34% CPI1 1 0.34% SMO1/SMO2 1 0.34% BR6OX1/CYP85A1 1 0.34% SQE 1 0.34% CYP51G1 1 0.34% DXS 1 0.34% MVK 1 0.34% DXR 1 0.34% HDR/IspH 1 0.34% MDS/IspF 1 0.34% CMK/IspE 1 0.34% UGT 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 42 13 BAHD (16) View species results
Alkaloid pathway 18 6 NMT (9) View species results
Phenylpropanoid pathway 16 5 POD (9) View species results
Steroid pathway 14 8 SMT1/SMT2/SMT3 (4) View species results
Rosmarinic acid pathway 7 3 CPR (4) View species results
Flavonoid pathway 4 2 4CL (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 19 71 7DLH, BR6OX1/CYP85A1, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, IFS, SLS, T16H, T3O
BAHD/acyltransferase 2 23 BAHD, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Oluc01G0004680.1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc01G0006260.1 Flavonoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Oluc02G0000160.1 Flavonoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Oluc02G0004680.1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc03G0002580.1 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc04G0005140.1 Flavonoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc05G0000240.1 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Oluc12G0001040.1 Flavonoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Oluc15G0000120.1 Flavonoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Oluc15G0001890.1 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Oluc01G0004680.1 Phenylpropanoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc01G0006260.1 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Oluc02G0000160.1 Phenylpropanoid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Oluc02G0004680.1 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc03G0002580.1 Phenylpropanoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc04G0005140.1 Phenylpropanoid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc05G0000240.1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Oluc12G0001040.1 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Oluc15G0000120.1 Phenylpropanoid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Oluc15G0001890.1 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Oluc01G0004680.1 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc01G0006260.1 Rosmarinic Acid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
Oluc02G0000160.1 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Oluc02G0004680.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc03G0002580.1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Oluc04G0005140.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Oluc05G0000240.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Oluc12G0001040.1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Oluc15G0000120.1 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
Oluc15G0001890.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH