PlantSME Plant secondary metabolism enzyme database

Ostreococcus lucimarinus (ostreococcus_lucimarinus)

Imported from atlas release summary for Ostreococcus lucimarinus.

101
Candidate Genes
74
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 41.58% Alkaloid pathway 17.82% Phenylpropanoid pathway 15.84% Steroid pathway 13.86% Rosmarinic acid pathway 6.93% Flavonoid pathway 3.96%
Family Distribution
4CL 10.14% NMT 9.12% BAHD 6.76% CYP71 5.07% IFR 4.73% C4H 3.72% C3'H/CYP98A 3.38% POD 3.04%
Other Families 54.05%
More Families (66)
CNMT 8 2.7% CPR 7 2.36% GS 6 2.03% STR 6 2.03% FNS 6 2.03% CYP76 6 2.03% H6H 5 1.69% SMT1/SMT2/SMT3 5 1.69% SQS/FDFT1 5 1.69% TRI/TRII 4 1.35% F3H 4 1.35% CSE 4 1.35% CAD 4 1.35% T3O 3 1.01% SLS 3 1.01% CCR 3 1.01% TAT 3 1.01% RAS 3 1.01% CPD/CYP90A1 3 1.01% DET2 3 1.01% CAS 3 1.01% CYP90D1 3 1.01% DWF4/CYP90B1 3 1.01% FPPS 3 1.01% GGPPS 3 1.01% 7DLH 2 0.68% CYP719 2 0.68% PMT 2 0.68% CYP80B1 2 0.68% 16OMT 2 0.68% 8HGO 2 0.68% ANS/LDOX 2 0.68% F3'5'H/CYP75A 2 0.68% ANR 2 0.68% HDS/IspG 2 0.68% AACT 2 0.68% MCT/IspD 2 0.68% IDI 2 0.68% CODM/T6ODM 1 0.34% TYDC_DDC 1 0.34% MPO 1 0.34% ODC 1 0.34% GES 1 0.34% T16H 1 0.34% SGD 1 0.34% PYKS 1 0.34% CYP80F1 1 0.34% F3'H/CYP75B 1 0.34% IFS 1 0.34% DFR 1 0.34% CCoAOMT 1 0.34% LAC 1 0.34% HYD1 1 0.34% FK 1 0.34% CPI1 1 0.34% SMO1/SMO2 1 0.34% BR6OX1/CYP85A1 1 0.34% SQE 1 0.34% CYP51G1 1 0.34% DXS 1 0.34% MVK 1 0.34% DXR 1 0.34% HDR/IspH 1 0.34% MDS/IspF 1 0.34% CMK/IspE 1 0.34% UGT 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 42 13 BAHD (16) View species results
Alkaloid pathway 18 6 NMT (9) View species results
Phenylpropanoid pathway 16 5 POD (9) View species results
Steroid pathway 14 8 SMT1/SMT2/SMT3 (4) View species results
Rosmarinic acid pathway 7 3 CPR (4) View species results
Flavonoid pathway 4 2 4CL (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 19 71 7DLH, BR6OX1/CYP85A1, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, IFS, SLS, T16H, T3O
BAHD/acyltransferase 2 23 BAHD, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
Oluc01G0003870.1 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
Oluc05G0003890.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Oluc09G0000120.1 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Oluc09G0000180.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Oluc09G0000580.1 Phenylpropanoid POD medium pass POD__00009__sp_P83564_GPX1_CHLRE
Oluc09G0001470.1 Phenylpropanoid POD medium pass POD__00012__sp_Q10N21_APX1_ORYSJ
Oluc12G0000240.1 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
Oluc21G0001660.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Oluc21G0001730.1 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC