Panax stipuleanatus (panax_stipuleanatus)
Imported from atlas release summary for Panax stipuleanatus.
1576
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1576
Candidate Genes
BAHD
6.53%
C4H
5.41%
C3'H/CYP98A
5.31%
4CL
4.86%
POD
4.01%
UGT
3.95%
IFS
3.58%
7DLGT
3.53%
Other Families
62.83%
More Families (95)
UFGT
130
3.45%
CYP76
125
3.32%
T3O
119
3.16%
NMT
92
2.44%
F3H
89
2.36%
BBE
76
2.02%
F3'H/CYP75B
76
2.02%
DWF4/CYP90B1
76
2.02%
CAD
64
1.7%
STR
63
1.67%
CAS
61
1.62%
CYP71
56
1.49%
BR6OX2/CYP85A2
55
1.46%
CODM/T6ODM
53
1.41%
SMT1/SMT2/SMT3
43
1.14%
TRI/TRII
41
1.09%
CYP90D1
41
1.09%
LAC
39
1.03%
CSE
39
1.03%
TPS
39
1.03%
HCT
38
1.01%
H6H
37
0.98%
TAT
37
0.98%
GES
36
0.96%
GS
36
0.96%
PYKS
34
0.9%
IFR
33
0.88%
T16H
31
0.82%
CPD/CYP90A1
31
0.82%
PAL
30
0.8%
F5H/CYP84A
28
0.74%
RAS
28
0.74%
IO
27
0.72%
7DLH
25
0.66%
COMT
25
0.66%
SLS
23
0.61%
PMT
21
0.56%
CCR
21
0.56%
NCS
20
0.53%
CYP51G1
20
0.53%
ANR
19
0.5%
CPR
19
0.5%
F3'5'H/CYP75A
18
0.48%
SGD
16
0.42%
SQE
16
0.42%
LAMT
15
0.4%
G8O/G8H
15
0.4%
16OMT
15
0.4%
FNS
14
0.37%
COR
13
0.34%
8HGO
13
0.34%
DFR
13
0.34%
GGPPS
13
0.34%
BR6OX1/CYP85A1
12
0.32%
FPPS
12
0.32%
DXS
12
0.32%
ROT3/CYP90C1
10
0.27%
CHS
9
0.24%
CCoAOMT
9
0.24%
MVK
9
0.24%
MPO
8
0.21%
CYP719
8
0.21%
SQS/FDFT1
8
0.21%
HMGR
8
0.21%
TDC
7
0.19%
ISY
7
0.19%
AACT
7
0.19%
CYP80B1
6
0.16%
ANS/LDOX
6
0.16%
DET2
6
0.16%
HPPR
5
0.13%
MDS/IspF
5
0.13%
ADC
4
0.11%
CNMT
4
0.11%
CHI
4
0.11%
SMO1/SMO2
4
0.11%
MVD
4
0.11%
HMGS
4
0.11%
PMK
4
0.11%
TYDC_DDC
3
0.08%
HYD1
3
0.08%
HDS/IspG
3
0.08%
HDR/IspH
3
0.08%
DXR
3
0.08%
DWF7
2
0.05%
MCT/IspD
2
0.05%
IDI
2
0.05%
CYP80F1
1
0.03%
XMT_MXMT_DXMT
1
0.03%
6OMT_4OMT_SOMT
1
0.03%
CPI1
1
0.03%
DWF1
1
0.03%
FK
1
0.03%
DWF5
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 498 | 19 | BAHD (201) | View species results |
| Phenylpropanoid pathway | 319 | 11 | POD (131) | View species results |
| Alkaloid pathway | 311 | 20 | 7DLGT (52) | View species results |
| Flavonoid pathway | 190 | 11 | UFGT (116) | View species results |
| Rosmarinic acid pathway | 148 | 7 | C4H (50) | View species results |
| Steroid pathway | 110 | 13 | CAS (49) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1342 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 312 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| panax_stipuleanatus_GWHPBEIJ010883.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ012388.1 | Alkaloid | SLS | low | borderline |
| panax_stipuleanatus_GWHPBEIJ014743.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ016132.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ016580.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ017576.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ020991.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ020992.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ020993.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ020994.1 | Alkaloid | SLS | medium | pass |
| panax_stipuleanatus_GWHPBEIJ020995.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ020996.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ022199.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ025536.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ025596.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ026980.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ027434.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ028411.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ029186.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ032419.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ037070.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ037149.1 | Alkaloid | SLS | medium | borderline |
| panax_stipuleanatus_GWHPBEIJ038081.1 | Alkaloid | SLS | medium | borderline |