PlantSME Plant secondary metabolism enzyme database

Panax stipuleanatus (panax_stipuleanatus)

Imported from atlas release summary for Panax stipuleanatus.

1904
Candidate Protein Records
1576
Pathway-Level Records
3769
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 31.6% Phenylpropanoid pathway 20.24% Alkaloid pathway 19.73% Flavonoid pathway 12.06% Rosmarinic acid pathway 9.39% Steroid pathway 6.98%
Family Distribution
BAHD 6.53% C4H 5.41% C3'H/CYP98A 5.31% 4CL 4.86% POD 4.01% UGT 3.95% IFS 3.58% 7DLGT 3.53%
Other Families 62.83%
More Families (95)
UFGT 130 3.45% CYP76 125 3.32% T3O 119 3.16% NMT 92 2.44% F3H 89 2.36% BBE 76 2.02% F3'H/CYP75B 76 2.02% DWF4/CYP90B1 76 2.02% CAD 64 1.7% STR 63 1.67% CAS 61 1.62% CYP71 56 1.49% BR6OX2/CYP85A2 55 1.46% CODM/T6ODM 53 1.41% SMT1/SMT2/SMT3 43 1.14% TRI/TRII 41 1.09% CYP90D1 41 1.09% LAC 39 1.03% CSE 39 1.03% TPS 39 1.03% HCT 38 1.01% H6H 37 0.98% TAT 37 0.98% GES 36 0.96% GS 36 0.96% PYKS 34 0.9% IFR 33 0.88% T16H 31 0.82% CPD/CYP90A1 31 0.82% PAL 30 0.8% F5H/CYP84A 28 0.74% RAS 28 0.74% IO 27 0.72% 7DLH 25 0.66% COMT 25 0.66% SLS 23 0.61% PMT 21 0.56% CCR 21 0.56% NCS 20 0.53% CYP51G1 20 0.53% ANR 19 0.5% CPR 19 0.5% F3'5'H/CYP75A 18 0.48% SGD 16 0.42% SQE 16 0.42% LAMT 15 0.4% G8O/G8H 15 0.4% 16OMT 15 0.4% FNS 14 0.37% COR 13 0.34% 8HGO 13 0.34% DFR 13 0.34% GGPPS 13 0.34% BR6OX1/CYP85A1 12 0.32% FPPS 12 0.32% DXS 12 0.32% ROT3/CYP90C1 10 0.27% CHS 9 0.24% CCoAOMT 9 0.24% MVK 9 0.24% MPO 8 0.21% CYP719 8 0.21% SQS/FDFT1 8 0.21% HMGR 8 0.21% TDC 7 0.19% ISY 7 0.19% AACT 7 0.19% CYP80B1 6 0.16% ANS/LDOX 6 0.16% DET2 6 0.16% HPPR 5 0.13% MDS/IspF 5 0.13% ADC 4 0.11% CNMT 4 0.11% CHI 4 0.11% SMO1/SMO2 4 0.11% MVD 4 0.11% HMGS 4 0.11% PMK 4 0.11% TYDC_DDC 3 0.08% HYD1 3 0.08% HDS/IspG 3 0.08% HDR/IspH 3 0.08% DXR 3 0.08% DWF7 2 0.05% MCT/IspD 2 0.05% IDI 2 0.05% CYP80F1 1 0.03% XMT_MXMT_DXMT 1 0.03% 6OMT_4OMT_SOMT 1 0.03% CPI1 1 0.03% DWF1 1 0.03% FK 1 0.03% DWF5 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 498 19 BAHD (201) View species results
Phenylpropanoid pathway 319 11 POD (131) View species results
Alkaloid pathway 311 20 7DLGT (52) View species results
Flavonoid pathway 190 11 UFGT (116) View species results
Rosmarinic acid pathway 148 7 C4H (50) View species results
Steroid pathway 110 13 CAS (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 312 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
panax_stipuleanatus_GWHPBEIJ036153.1 Terpenoid UGT low borderline UGT__00022__sp_B2XBQ5_85A19_PRUDU
panax_stipuleanatus_GWHPBEIJ036665.1 Terpenoid UGT medium pass UGT__00018__sp_A0A224AM54_708G1_CITJP
panax_stipuleanatus_GWHPBEIJ037660.1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
panax_stipuleanatus_GWHPBEIJ037818.1 Terpenoid UGT medium pass UGT__00057__sp_O81498_U72E3_ARATH
panax_stipuleanatus_GWHPBEIJ037819.1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
panax_stipuleanatus_GWHPBEIJ038141.1 Terpenoid UGT medium pass UGT__00076__sp_Q8L7M0_TUN_ARATH
panax_stipuleanatus_GWHPBEIJ038204.1 Terpenoid UGT medium pass UGT__00015__sp_A0A193AU77_GGT24_PUNGR