PlantSME Plant secondary metabolism enzyme database

Papaver somniferum (papaver_somniferum)

Imported from atlas release summary for Papaver somniferum.

3307
Candidate Protein Records
2488
Pathway-Level Records
6819
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 28.22% Alkaloid pathway 22.55% Phenylpropanoid pathway 22.55% Flavonoid pathway 12.38% Rosmarinic acid pathway 9.04% Steroid pathway 5.27%
Family Distribution
C4H 6.47% C3'H/CYP98A 6.07% BAHD 5.76% CYP76 4.5% POD 4.21% IFS 3.86% UGT 3.59% 7DLGT 3.21%
Other Families 62.33%
More Families (98)
F3H 212 3.11% 4CL 210 3.08% UFGT 210 3.08% T3O 200 2.93% CODM/T6ODM 163 2.39% DWF4/CYP90B1 148 2.17% NMT 146 2.14% F3'H/CYP75B 125 1.83% STR 122 1.79% BR6OX2/CYP85A2 120 1.76% IO 100 1.47% HCT 88 1.29% CYP90D1 85 1.25% H6H 83 1.22% NCS 79 1.16% TRI/TRII 78 1.14% CYP71 76 1.11% F3'5'H/CYP75A 74 1.09% G8O/G8H 68 1.0% PYKS 67 0.98% COMT 67 0.98% CAD 66 0.97% SMT1/SMT2/SMT3 64 0.94% CAS 60 0.88% TAT 58 0.85% SGD 54 0.79% T16H 54 0.79% F5H/CYP84A 54 0.79% RAS 53 0.78% 16OMT 51 0.75% LAC 51 0.75% BBE 47 0.69% FNS 45 0.66% CSE 45 0.66% IFR 41 0.6% GS 39 0.57% TYDC_DDC 39 0.57% BR6OX1/CYP85A1 38 0.56% CPD/CYP90A1 38 0.56% PMT 37 0.54% ANS/LDOX 36 0.53% PAL 36 0.53% CCR 36 0.53% COR 35 0.51% CYP719 34 0.5% GES 33 0.48% 7DLH 33 0.48% CNMT 32 0.47% ANR 32 0.47% TPS 30 0.44% SLS 29 0.43% 8HGO 25 0.37% LAMT 24 0.35% CYP51G1 23 0.34% FPPS 21 0.31% ROT3/CYP90C1 20 0.29% DFR 19 0.28% CCoAOMT 18 0.26% CPR 18 0.26% MPO 16 0.23% CYP80B1 15 0.22% GGPPS 15 0.22% AACT 13 0.19% 6OMT_4OMT_SOMT 12 0.18% CHI 12 0.18% CHS 12 0.18% HPPR 11 0.16% SQS/FDFT1 11 0.16% MVK 11 0.16% DET2 10 0.15% SMO1/SMO2 10 0.15% GPPS 10 0.15% TDC 8 0.12% MVD 8 0.12% CPI1 7 0.1% FLS 6 0.09% DWF5 6 0.09% DXS 6 0.09% ISY 5 0.07% XMT_MXMT_DXMT 5 0.07% SQE 5 0.07% HDR/IspH 5 0.07% ODC 4 0.06% CYP80F1 4 0.06% HMGR 4 0.06% IDI 4 0.06% ADC 3 0.04% DXR 3 0.04% PMK 3 0.04% HMGS 3 0.04% HYD1 2 0.03% DWF1 2 0.03% DWF7 2 0.03% FK 2 0.03% MCT/IspD 2 0.03% HDS/IspG 2 0.03% MDS/IspF 1 0.01% CMK/IspE 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 702 20 BAHD (261) View species results
Alkaloid pathway 561 25 7DLGT (91) View species results
Phenylpropanoid pathway 561 12 POD (255) View species results
Flavonoid pathway 308 14 UFGT (197) View species results
Rosmarinic acid pathway 225 7 C4H (80) View species results
Steroid pathway 131 14 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2763 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 534 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PsomGWHAAFE000026780021980.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
PsomGWHAAFE000036780030110.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
PsomGWHAAFE000037890034590.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
PsomGWHAAFE000042330040100.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
PsomGWHAAFE000100110054090.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
PsomGWHAAFE000100110054340.1 Rosmarinic Acid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
PsomGWHAAFE000133450062300.1 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
PsomGWHAAFE000133450062310.1 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
PsomGWHAAFE000327210091180.1 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
PsomGWHAAFE000343870093970.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH