Papaver somniferum (papaver_somniferum)
Imported from atlas release summary for Papaver somniferum.
2488
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2488
Candidate Genes
C4H
6.47%
C3'H/CYP98A
6.07%
BAHD
5.76%
CYP76
4.5%
POD
4.21%
IFS
3.86%
UGT
3.59%
7DLGT
3.21%
Other Families
62.33%
More Families (98)
F3H
212
3.11%
4CL
210
3.08%
UFGT
210
3.08%
T3O
200
2.93%
CODM/T6ODM
163
2.39%
DWF4/CYP90B1
148
2.17%
NMT
146
2.14%
F3'H/CYP75B
125
1.83%
STR
122
1.79%
BR6OX2/CYP85A2
120
1.76%
IO
100
1.47%
HCT
88
1.29%
CYP90D1
85
1.25%
H6H
83
1.22%
NCS
79
1.16%
TRI/TRII
78
1.14%
CYP71
76
1.11%
F3'5'H/CYP75A
74
1.09%
G8O/G8H
68
1.0%
PYKS
67
0.98%
COMT
67
0.98%
CAD
66
0.97%
SMT1/SMT2/SMT3
64
0.94%
CAS
60
0.88%
TAT
58
0.85%
SGD
54
0.79%
T16H
54
0.79%
F5H/CYP84A
54
0.79%
RAS
53
0.78%
16OMT
51
0.75%
LAC
51
0.75%
BBE
47
0.69%
FNS
45
0.66%
CSE
45
0.66%
IFR
41
0.6%
GS
39
0.57%
TYDC_DDC
39
0.57%
BR6OX1/CYP85A1
38
0.56%
CPD/CYP90A1
38
0.56%
PMT
37
0.54%
ANS/LDOX
36
0.53%
PAL
36
0.53%
CCR
36
0.53%
COR
35
0.51%
CYP719
34
0.5%
GES
33
0.48%
7DLH
33
0.48%
CNMT
32
0.47%
ANR
32
0.47%
TPS
30
0.44%
SLS
29
0.43%
8HGO
25
0.37%
LAMT
24
0.35%
CYP51G1
23
0.34%
FPPS
21
0.31%
ROT3/CYP90C1
20
0.29%
DFR
19
0.28%
CCoAOMT
18
0.26%
CPR
18
0.26%
MPO
16
0.23%
CYP80B1
15
0.22%
GGPPS
15
0.22%
AACT
13
0.19%
6OMT_4OMT_SOMT
12
0.18%
CHI
12
0.18%
CHS
12
0.18%
HPPR
11
0.16%
SQS/FDFT1
11
0.16%
MVK
11
0.16%
DET2
10
0.15%
SMO1/SMO2
10
0.15%
GPPS
10
0.15%
TDC
8
0.12%
MVD
8
0.12%
CPI1
7
0.1%
FLS
6
0.09%
DWF5
6
0.09%
DXS
6
0.09%
ISY
5
0.07%
XMT_MXMT_DXMT
5
0.07%
SQE
5
0.07%
HDR/IspH
5
0.07%
ODC
4
0.06%
CYP80F1
4
0.06%
HMGR
4
0.06%
IDI
4
0.06%
ADC
3
0.04%
DXR
3
0.04%
PMK
3
0.04%
HMGS
3
0.04%
HYD1
2
0.03%
DWF1
2
0.03%
DWF7
2
0.03%
FK
2
0.03%
MCT/IspD
2
0.03%
HDS/IspG
2
0.03%
MDS/IspF
1
0.01%
CMK/IspE
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 702 | 20 | BAHD (261) | View species results |
| Alkaloid pathway | 561 | 25 | 7DLGT (91) | View species results |
| Phenylpropanoid pathway | 561 | 12 | POD (255) | View species results |
| Flavonoid pathway | 308 | 14 | UFGT (197) | View species results |
| Rosmarinic acid pathway | 225 | 7 | C4H (80) | View species results |
| Steroid pathway | 131 | 14 | CAS (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2763 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Psom01G0013030.1 | Alkaloid | PMT | low | borderline |
| Psom01G0048560.1 | Alkaloid | PMT | low | borderline |
| Psom02G0004720.1 | Alkaloid | PMT | medium | pass |
| Psom02G0009720.1 | Alkaloid | PMT | medium | pass |
| Psom02G0011640.1 | Alkaloid | PMT | medium | pass |
| Psom02G0011650.1 | Alkaloid | PMT | low | borderline |
| Psom02G0015240.1 | Alkaloid | PMT | low | borderline |
| Psom02G0033870.1 | Alkaloid | PMT | low | borderline |
| Psom02G0042140.1 | Alkaloid | PMT | medium | pass |
| Psom03G0030370.1 | Alkaloid | PMT | low | borderline |
| Psom03G0035590.1 | Alkaloid | PMT | medium | borderline |
| Psom03G0036970.1 | Alkaloid | PMT | low | borderline |
| Psom03G0038000.1 | Alkaloid | PMT | low | borderline |
| Psom04G0000880.1 | Alkaloid | PMT | low | borderline |
| Psom04G0021320.1 | Alkaloid | PMT | medium | borderline |
| Psom04G0024610.1 | Alkaloid | PMT | medium | pass |
| Psom04G0026990.1 | Alkaloid | PMT | low | borderline |
| Psom05G0006430.1 | Alkaloid | PMT | low | borderline |
| Psom05G0017840.1 | Alkaloid | PMT | medium | borderline |
| Psom05G0032480.1 | Alkaloid | PMT | medium | pass |
| Psom05G0032490.1 | Alkaloid | PMT | low | borderline |
| Psom05G0033550.1 | Alkaloid | PMT | low | borderline |
| Psom05G0033560.1 | Alkaloid | PMT | low | borderline |
| Psom06G0022240.1 | Alkaloid | PMT | low | borderline |
| Psom07G0013610.1 | Alkaloid | PMT | medium | pass |
| Psom07G0017820.1 | Alkaloid | PMT | medium | borderline |
| Psom07G0027340.1 | Alkaloid | PMT | low | borderline |
| Psom07G0029310.1 | Alkaloid | PMT | medium | borderline |
| Psom07G0031490.1 | Alkaloid | PMT | low | borderline |
| Psom08G0016480.1 | Alkaloid | PMT | medium | pass |
| Psom10G0001430.1 | Alkaloid | PMT | medium | borderline |
| Psom11G0027430.1 | Alkaloid | PMT | medium | borderline |
| Psom11G0028840.1 | Alkaloid | PMT | low | borderline |
| PsomGWHAAFE000011230006470.1 | Alkaloid | PMT | low | borderline |
| PsomGWHAAFE000133450062530.1 | Alkaloid | PMT | medium | borderline |
| PsomGWHAAFE000244560072880.1 | Alkaloid | PMT | low | borderline |
| PsomGWHAAFE000314990082550.1 | Alkaloid | PMT | low | borderline |