PlantSME Plant secondary metabolism enzyme database

Papaver somniferum (papaver_somniferum)

Imported from atlas release summary for Papaver somniferum.

2488
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.22% Alkaloid pathway 22.55% Phenylpropanoid pathway 22.55% Flavonoid pathway 12.38% Rosmarinic acid pathway 9.04% Steroid pathway 5.27%
Family Distribution
C4H 6.47% C3'H/CYP98A 6.07% BAHD 5.76% CYP76 4.5% POD 4.21% IFS 3.86% UGT 3.59% 7DLGT 3.21%
Other Families 62.33%
More Families (98)
F3H 212 3.11% 4CL 210 3.08% UFGT 210 3.08% T3O 200 2.93% CODM/T6ODM 163 2.39% DWF4/CYP90B1 148 2.17% NMT 146 2.14% F3'H/CYP75B 125 1.83% STR 122 1.79% BR6OX2/CYP85A2 120 1.76% IO 100 1.47% HCT 88 1.29% CYP90D1 85 1.25% H6H 83 1.22% NCS 79 1.16% TRI/TRII 78 1.14% CYP71 76 1.11% F3'5'H/CYP75A 74 1.09% G8O/G8H 68 1.0% PYKS 67 0.98% COMT 67 0.98% CAD 66 0.97% SMT1/SMT2/SMT3 64 0.94% CAS 60 0.88% TAT 58 0.85% SGD 54 0.79% T16H 54 0.79% F5H/CYP84A 54 0.79% RAS 53 0.78% 16OMT 51 0.75% LAC 51 0.75% BBE 47 0.69% FNS 45 0.66% CSE 45 0.66% IFR 41 0.6% GS 39 0.57% TYDC_DDC 39 0.57% BR6OX1/CYP85A1 38 0.56% CPD/CYP90A1 38 0.56% PMT 37 0.54% ANS/LDOX 36 0.53% PAL 36 0.53% CCR 36 0.53% COR 35 0.51% CYP719 34 0.5% GES 33 0.48% 7DLH 33 0.48% CNMT 32 0.47% ANR 32 0.47% TPS 30 0.44% SLS 29 0.43% 8HGO 25 0.37% LAMT 24 0.35% CYP51G1 23 0.34% FPPS 21 0.31% ROT3/CYP90C1 20 0.29% DFR 19 0.28% CCoAOMT 18 0.26% CPR 18 0.26% MPO 16 0.23% CYP80B1 15 0.22% GGPPS 15 0.22% AACT 13 0.19% 6OMT_4OMT_SOMT 12 0.18% CHI 12 0.18% CHS 12 0.18% HPPR 11 0.16% SQS/FDFT1 11 0.16% MVK 11 0.16% DET2 10 0.15% SMO1/SMO2 10 0.15% GPPS 10 0.15% TDC 8 0.12% MVD 8 0.12% CPI1 7 0.1% FLS 6 0.09% DWF5 6 0.09% DXS 6 0.09% ISY 5 0.07% XMT_MXMT_DXMT 5 0.07% SQE 5 0.07% HDR/IspH 5 0.07% ODC 4 0.06% CYP80F1 4 0.06% HMGR 4 0.06% IDI 4 0.06% ADC 3 0.04% DXR 3 0.04% PMK 3 0.04% HMGS 3 0.04% HYD1 2 0.03% DWF1 2 0.03% DWF7 2 0.03% FK 2 0.03% MCT/IspD 2 0.03% HDS/IspG 2 0.03% MDS/IspF 1 0.01% CMK/IspE 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 702 20 BAHD (261) View species results
Alkaloid pathway 561 25 7DLGT (91) View species results
Phenylpropanoid pathway 561 12 POD (255) View species results
Flavonoid pathway 308 14 UFGT (197) View species results
Rosmarinic acid pathway 225 7 C4H (80) View species results
Steroid pathway 131 14 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2763 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 534 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 6OMT_4OMT_SOMT
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Gene Pathway Family Confidence Status Best Target
Psom01G0017170.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
Psom01G0032370.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
Psom01G0048290.1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
Psom02G0012920.1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00006__sp_Q7XB11_4OMT1_PAPSO
Psom02G0012940.1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00006__sp_Q7XB11_4OMT1_PAPSO
Psom02G0012960.1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00006__sp_Q7XB11_4OMT1_PAPSO
Psom02G0032240.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
Psom02G0041820.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00005__sp_Q7XB10_4OMT2_PAPSO
Psom06G0000940.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
Psom06G0026270.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
Psom09G0015950.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
PsomGWHAAFE000020110016770.1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA