PlantSME Plant secondary metabolism enzyme database

Phaseolus acutifolius (phaseolus_acutifolius)

Imported from atlas release summary for Phaseolus acutifolius.

2348
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 635 19 BAHD (270) View species results
Alkaloid pathway 625 20 NMT (136) View species results
Phenylpropanoid pathway 452 11 POD (195) View species results
Flavonoid pathway 290 12 UFGT (185) View species results
Steroid pathway 183 12 CAS (89) View species results
Rosmarinic acid pathway 163 7 C4H (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1770 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
Pacu02G0002180.2 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu02G0002180.3 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu02G0002180.4 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu02G0011460.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu02G0013310.1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu02G0029390.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu03G0001030.1 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pacu03G0001030.2 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pacu03G0003620.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu03G0003630.1 Rosmarinic Acid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
Pacu03G0005400.1 Rosmarinic Acid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
Pacu03G0005400.2 Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
Pacu03G0014770.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu03G0014780.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu03G0015230.1 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0015230.2 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0015230.3 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0015240.1 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0015240.2 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0015240.3 Rosmarinic Acid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu03G0027760.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu03G0027760.2 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu04G0005080.1 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pacu04G0005080.2 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
Pacu04G0011210.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu04G0011210.2 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu05G0013110.1 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pacu05G0013110.2 Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
Pacu05G0018560.1 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pacu05G0018560.2 Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
Pacu06G0001660.1 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pacu06G0001660.2 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Pacu06G0001700.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Pacu06G0006020.1 Rosmarinic Acid 4CL medium pass 4CL__00009__sp_Q67W82_4CL4_ORYSJ
Pacu06G0006020.2 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pacu06G0008460.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu06G0008460.2 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu06G0008460.3 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu06G0009100.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu06G0012880.1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Pacu06G0013400.1 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pacu06G0013400.2 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Pacu07G0005500.1 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu07G0005500.2 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu07G0005500.3 Rosmarinic Acid 4CL low borderline 4CL__00003__sp_M4ISH0_CCL1_HUMLU
Pacu07G0007150.1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Pacu07G0014510.1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pacu07G0014510.2 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pacu07G0014510.3 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Pacu07G0021820.1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH