PlantSME Plant secondary metabolism enzyme database

Phaseolus acutifolius (phaseolus_acutifolius)

Imported from atlas release summary for Phaseolus acutifolius.

2348
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 635 19 BAHD (270) View species results
Alkaloid pathway 625 20 NMT (136) View species results
Phenylpropanoid pathway 452 11 POD (195) View species results
Flavonoid pathway 290 12 UFGT (185) View species results
Steroid pathway 183 12 CAS (89) View species results
Rosmarinic acid pathway 163 7 C4H (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1770 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Pacu04G0005790.2 Rosmarinic Acid C4H low borderline
Pacu04G0006140.1 Rosmarinic Acid C4H low borderline
Pacu04G0006170.1 Rosmarinic Acid C4H low borderline
Pacu04G0006180.1 Rosmarinic Acid C4H medium pass
Pacu04G0008250.1 Rosmarinic Acid C4H low borderline
Pacu04G0008280.1 Rosmarinic Acid C4H low borderline
Pacu04G0009370.1 Rosmarinic Acid C4H low borderline
Pacu04G0009390.1 Rosmarinic Acid C4H low borderline
Pacu04G0011610.1 Rosmarinic Acid C4H medium pass
Pacu04G0011630.1 Rosmarinic Acid C4H medium pass
Pacu04G0011640.1 Rosmarinic Acid C4H medium pass
Pacu04G0011650.1 Rosmarinic Acid C4H medium pass
Pacu04G0011660.1 Rosmarinic Acid C4H medium pass
Pacu04G0012240.1 Rosmarinic Acid C4H low borderline
Pacu04G0013410.1 Rosmarinic Acid C4H low borderline
Pacu04G0013410.2 Rosmarinic Acid C4H low borderline
Pacu04G0013410.3 Rosmarinic Acid C4H low borderline
Pacu04G0013410.4 Rosmarinic Acid C4H low borderline
Pacu04G0013410.5 Rosmarinic Acid C4H low borderline
Pacu04G0015830.1 Rosmarinic Acid C4H medium pass
Pacu04G0015840.1 Rosmarinic Acid C4H medium pass
Pacu04G0015850.1 Rosmarinic Acid C4H medium pass
Pacu04G0015860.1 Rosmarinic Acid C4H medium pass
Pacu04G0015880.1 Rosmarinic Acid C4H medium pass
Pacu05G0000630.1 Rosmarinic Acid C4H low borderline
Pacu05G0001450.1 Rosmarinic Acid C4H low borderline
Pacu05G0004980.1 Rosmarinic Acid C4H low borderline
Pacu05G0006040.1 Rosmarinic Acid C4H low borderline
Pacu05G0006100.1 Rosmarinic Acid C4H low borderline
Pacu05G0006100.2 Rosmarinic Acid C4H low borderline
Pacu05G0006110.1 Rosmarinic Acid C4H low borderline
Pacu05G0006220.1 Rosmarinic Acid C4H low borderline
Pacu05G0018460.1 Rosmarinic Acid C4H low borderline
Pacu05G0018460.3 Rosmarinic Acid C4H low borderline
Pacu06G0000480.1 Rosmarinic Acid C4H medium pass
Pacu06G0001330.1 Rosmarinic Acid C4H low borderline
Pacu06G0001330.2 Rosmarinic Acid C4H low borderline
Pacu06G0002350.1 Rosmarinic Acid C4H low borderline
Pacu06G0003200.1 Rosmarinic Acid C4H low borderline
Pacu06G0004360.1 Rosmarinic Acid C4H medium pass
Pacu06G0005680.1 Rosmarinic Acid C4H medium pass
Pacu06G0005690.1 Rosmarinic Acid C4H medium pass
Pacu06G0005700.1 Rosmarinic Acid C4H low borderline
Pacu06G0005710.1 Rosmarinic Acid C4H low borderline
Pacu06G0005720.1 Rosmarinic Acid C4H low borderline
Pacu06G0005730.1 Rosmarinic Acid C4H low borderline
Pacu06G0008330.1 Rosmarinic Acid C4H low borderline
Pacu06G0008350.1 Rosmarinic Acid C4H low borderline
Pacu06G0008360.1 Rosmarinic Acid C4H low borderline
Pacu06G0008370.1 Rosmarinic Acid C4H low borderline