Phaseolus lunatus (phaseolus_lunatus)
Imported from atlas release summary for Phaseolus lunatus.
2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2021
Candidate Genes
C3'H/CYP98A
5.78%
C4H
5.65%
BAHD
5.54%
UGT
4.61%
UFGT
4.3%
7DLGT
4.19%
POD
3.49%
CYP76
3.36%
Other Families
63.08%
More Families (97)
IFS
158
3.34%
4CL
150
3.17%
T3O
147
3.11%
F3H
131
2.77%
NMT
111
2.35%
DWF4/CYP90B1
104
2.2%
F3'H/CYP75B
99
2.09%
STR
91
1.93%
CODM/T6ODM
80
1.69%
H6H
74
1.57%
SGD
73
1.54%
BR6OX2/CYP85A2
73
1.54%
SMT1/SMT2/SMT3
73
1.54%
CYP71
73
1.54%
PAL
69
1.46%
CAD
68
1.44%
TRI/TRII
67
1.42%
CAS
61
1.29%
COMT
55
1.16%
CSE
48
1.02%
LAC
45
0.95%
T16H
44
0.93%
IFR
44
0.93%
HCT
44
0.93%
CYP90D1
41
0.87%
16OMT
40
0.85%
PYKS
39
0.83%
TPS
39
0.83%
GES
37
0.78%
7DLH
37
0.78%
BBE
34
0.72%
ANR
34
0.72%
RAS
34
0.72%
G8O/G8H
31
0.66%
FNS
31
0.66%
GS
30
0.63%
F5H/CYP84A
29
0.61%
F3'5'H/CYP75A
27
0.57%
CYP51G1
25
0.53%
CCR
24
0.51%
IO
23
0.49%
PMT
23
0.49%
ANS/LDOX
21
0.44%
BR6OX1/CYP85A1
21
0.44%
CHS
19
0.4%
CYP80B1
17
0.36%
COR
17
0.36%
SLS
16
0.34%
MPO
16
0.34%
CNMT
15
0.32%
CCoAOMT
15
0.32%
TAT
15
0.32%
CPD/CYP90A1
15
0.32%
LAMT
14
0.3%
8HGO
14
0.3%
NCS
14
0.3%
GGPPS
14
0.3%
DFR
11
0.23%
CPR
11
0.23%
SQE
10
0.21%
SQS/FDFT1
10
0.21%
DXS
10
0.21%
CYP719
9
0.19%
ISY
9
0.19%
CHI
9
0.19%
ROT3/CYP90C1
8
0.17%
HPPR
7
0.15%
DET2
7
0.15%
HMGS
7
0.15%
AACT
6
0.13%
SMO1/SMO2
5
0.11%
CPI1
5
0.11%
HMGR
5
0.11%
MVK
4
0.08%
FPPS
4
0.08%
MVD
4
0.08%
TDC
3
0.06%
6OMT_4OMT_SOMT
3
0.06%
MCT/IspD
3
0.06%
DXR
3
0.06%
PMK
3
0.06%
TYDC_DDC
2
0.04%
CYP80F1
2
0.04%
XMT_MXMT_DXMT
2
0.04%
DWF5
2
0.04%
DWF1
2
0.04%
HDR/IspH
2
0.04%
ADC
1
0.02%
ODC
1
0.02%
FLS
1
0.02%
DWF7
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
MDS/IspF
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 550 | 18 | BAHD (212) | View species results |
| Alkaloid pathway | 456 | 21 | 7DLGT (87) | View species results |
| Phenylpropanoid pathway | 420 | 11 | POD (159) | View species results |
| Flavonoid pathway | 298 | 9 | UFGT (192) | View species results |
| Rosmarinic acid pathway | 170 | 7 | C4H (73) | View species results |
| Steroid pathway | 127 | 11 | CAS (52) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1698 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 340 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Plun01G0001640.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun03G0024470.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Plun04G0031720.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun05G0007570.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun05G0007700.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun05G0007790.1 | Alkaloid | SLS | medium | pass | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun05G0019330.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun06G0019460.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun07G0007860.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun07G0007870.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun07G0034600.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun08G0000680.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun09G0028240.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| Plun10G0027230.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun10G0027240.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| Plun11G0000350.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |