PlantSME Plant secondary metabolism enzyme database

Physcomitrella patens (physcomitrella_patens)

Imported from atlas release summary for Physcomitrella patens.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 19 BAHD (308) View species results
Phenylpropanoid pathway 489 12 POD (277) View species results
Alkaloid pathway 391 17 NMT (72) View species results
Flavonoid pathway 162 9 UFGT (46) View species results
Rosmarinic acid pathway 152 7 C4H (49) View species results
Steroid pathway 135 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1256 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 460 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Ppat21G0009200.1 Steroid DWF4/CYP90B1 low borderline
Ppat21G0009200.2 Steroid DWF4/CYP90B1 low borderline
Ppat22G0008650.1 Steroid DWF4/CYP90B1 medium borderline
Ppat22G0008650.2 Steroid DWF4/CYP90B1 medium borderline
Ppat23G0001610.1 Steroid DWF4/CYP90B1 medium pass
Ppat23G0001610.2 Steroid DWF4/CYP90B1 medium pass
Ppat23G0002240.1 Steroid DWF4/CYP90B1 low borderline
Ppat23G0002240.2 Steroid DWF4/CYP90B1 low borderline
Ppat24G0007130.1 Steroid DWF4/CYP90B1 medium borderline
Ppat24G0007130.2 Steroid DWF4/CYP90B1 medium borderline
Ppat24G0007130.3 Steroid DWF4/CYP90B1 medium borderline
Ppat24G0008440.1 Steroid DWF4/CYP90B1 low borderline
Ppat24G0008440.2 Steroid DWF4/CYP90B1 low borderline
Ppat24G0008440.3 Steroid DWF4/CYP90B1 low borderline
Ppat27G0002680.1 Steroid DWF4/CYP90B1 medium borderline
Ppat27G0002680.2 Steroid DWF4/CYP90B1 medium borderline
Ppat27G0002730.1 Steroid DWF4/CYP90B1 medium borderline
Ppat27G0002730.2 Steroid DWF4/CYP90B1 medium borderline
Ppat27G0004040.2 Steroid DWF4/CYP90B1 low borderline
Ppat16G0012280.1 Steroid DWF5 medium pass
Ppat16G0012280.10 Steroid DWF5 medium pass
Ppat16G0012280.11 Steroid DWF5 medium pass
Ppat16G0012280.12 Steroid DWF5 high pass
Ppat16G0012280.13 Steroid DWF5 high pass
Ppat16G0012280.2 Steroid DWF5 high pass
Ppat16G0012280.3 Steroid DWF5 medium pass
Ppat16G0012280.4 Steroid DWF5 high pass
Ppat16G0012280.5 Steroid DWF5 high pass
Ppat16G0012280.6 Steroid DWF5 medium pass
Ppat16G0012280.7 Steroid DWF5 medium pass
Ppat16G0012280.8 Steroid DWF5 medium pass
Ppat16G0012280.9 Steroid DWF5 medium pass
Ppat24G0004570.1 Steroid DWF5 medium borderline
Ppat24G0004570.2 Steroid DWF5 medium borderline
Ppat24G0004570.3 Steroid DWF5 medium borderline
Ppat11G0009380.1 Steroid DWF7 medium pass
Ppat11G0009380.2 Steroid DWF7 medium pass
Ppat16G0006460.1 Steroid FK high pass
Ppat16G0006460.2 Steroid FK high pass
Ppat16G0006460.3 Steroid FK medium pass
Ppat09G0009100.1 Steroid HYD1 high pass
Ppat09G0009100.2 Steroid HYD1 high pass
Ppat09G0009100.3 Steroid HYD1 high pass
Ppat01G0005570.1 Steroid ROT3/CYP90C1 low borderline
Ppat01G0005570.2 Steroid ROT3/CYP90C1 low borderline
Ppat01G0005570.3 Steroid ROT3/CYP90C1 low borderline
Ppat02G0013530.1 Steroid ROT3/CYP90C1 low borderline
Ppat02G0013530.2 Steroid ROT3/CYP90C1 low borderline
Ppat02G0013530.3 Steroid ROT3/CYP90C1 low borderline
Ppat07G0008440.1 Steroid ROT3/CYP90C1 medium borderline