PlantSME Plant secondary metabolism enzyme database

Physcomitrella patens (physcomitrella_patens)

Imported from atlas release summary for Physcomitrella patens.

1885
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 19 BAHD (308) View species results
Phenylpropanoid pathway 489 12 POD (277) View species results
Alkaloid pathway 391 17 NMT (72) View species results
Flavonoid pathway 162 9 UFGT (46) View species results
Rosmarinic acid pathway 152 7 C4H (49) View species results
Steroid pathway 135 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1256 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 460 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status Best Target
Ppat07G0008440.2 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Ppat07G0000830.1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat07G0000830.2 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat07G0000830.3 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat07G0000830.4 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat11G0011630.1 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat11G0011630.2 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat11G0011630.3 Steroid SMO1/SMO2 medium pass SMO1_SMO2__00003__sp_Q8VWZ8_SMO22_ARATH
Ppat01G0000600.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0000600.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0011480.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0011480.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0011480.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0011480.4 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat01G0011480.5 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat04G0004140.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat04G0004140.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat04G0004140.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat04G0011690.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat04G0011690.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat04G0011690.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat06G0009870.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat07G0011100.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat07G0011100.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat08G0002830.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat08G0002830.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat08G0002830.3 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat08G0002830.4 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat08G0002830.5 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat08G0002830.6 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Ppat09G0009270.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat09G0009270.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat09G0011290.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat09G0011290.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat11G0003150.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat11G0003150.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat11G0003150.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat11G0011540.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat11G0011540.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat11G0011540.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat11G0011540.4 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005200.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005200.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005200.3 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005200.4 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005340.1 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0005340.2 Steroid SMT1/SMT2/SMT3 medium pass SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Ppat14G0012420.1 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat14G0012420.2 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Ppat14G0012420.3 Steroid SMT1/SMT2/SMT3 low borderline SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH